Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4278 ATGGAGACTGAGGAACTCATTGATTTGAACAGTAAAGAGATTAATTGTGGTGGAAATAATAGCAAGAGTGGTGATGGATTCATTGATAGGAGTAAAGTTAGGATTTTGCTGTGTGATAGCGATTCCAAGAGTTCTGAAGAGGTTTTTACTCTTCTTTTGAATTGCTCTTATCAGGTTACATCTGTAAAATCCGCAAGGCAAGTGATTGACGCATTGAATGCGGAAGGACAATATATAGATATTATACTAGCGGAAGTTGACCTTCCAATAAAAAAGGGAATGAAGATGTTGAAGTACATAGCACGGGATAAAGAATTGCGCCGAATCCCTATTATAATGATGTCTGCACAAGATGAGGTATCAATTGTTGTTAAGTGCTTGAGGCTCGGAGCAGCAGACTATCTAGTAAAGCCTTTACGTACTAATGAACTATTAAATTTGTGGACGCACATGTGGAGAAGGAGACGCATGCTTGGACTTATAGAGAACAACATCTTGAATTATGATTTTGATCTGGTAGCATCAGACCCTAGTGATGCCAATACAAACAGTGCCACCTTCTTCTCTGATGACACAGATGACAAGTCCAAAAGAAGCACTAATCCCGAGGCTGGAATTTCAATCCAACAAGAACAGGCTGGAATTTCAATCCAACAAGAACAAGAGGCTAGTATTGCCACTGCTGCTGCTGTTATTGAGGAGCATCCATATGCTCGTGCATCAGAATATCAGCCTGATGTACCCGGAATTAGTGATCGAAGAAGAACAGGTCCGAAGAAGAGTGAACTCAGAATTGGAGAATCATCAGCCTTTTTCACTTATGTCAAAGCAACAACAATGAAGAGCAACTTGGAAGAGATTGCTCATTTTGACAATAGTGGTACTTCACAAGTGAGGGTGGAAAATATGAATCAAGCATGTTCTCAACAAGGGGGTAATGACCTTATAAGACATGAAAATGGAGAAACGATTGAAAGCCAATCACAAGATGACTTACCTAGAAGCAATAGTATCCCTGATTCTTTCTCTGTTGAGAGATCGTGTACCCCACCTGCATCAATGGAGGTTTCACAGCAAAATAGTAATCACAAGGAAGAACATCCACAAGGGGTGGTTCATCCAAGAAATGAAATTTATGGTTCTGAGTTAAACCAATCGGGCATGCCTGCCCAACATGCTTATCCGTATTATATGTCAGGAGCTGCTAATCATGTTATGATGCAGTCATCAACACAAATGTATCAAAAGAATATCCAGAACCTTCAGAGTCATGTTAGTTCATCTATGATTGCCCAGTACAATCAACAACTTCTCCAATGTCCACCTCATGCAACTGGGATGACACCCTTCCCATATTTTCCAATGAGTATTTGTTTACAAACCGGTCAGGTTTCTACAGCTCATCCATGGCCGTCATTAGGAAGTTCAACTTCATGTGAAGCAAACTTGAGAAAAGTTGATAGGAGAGAAGCAGCATTGATGAAGTTTAGACAGAAAAGAAAAGAGCGTTGCTTCGATAAGAAAATTAGGTATGTCAATCGGAAACAACTTGCAGAAAGGCGGCCTCGTGTTAGGGGACAGTTTGTCAGGAAGTTGAATGGTATTAATGTGGATCTAAATGGACAACCTGCTTCCACCGACTATGATGATGAGGATGAAGAGGAGGAAGAAAACAATGACACCAGAGATTCCTCTCCTAAGGATGCTTGA 1710 0.4058 METEELIDLNSKEINCGGNNSKSGDGFIDRSKVRILLCDSDSKSSEEVFTLLLNCSYQVTSVKSARQVIDALNAEGQYIDIILAEVDLPIKKGMKMLKYIARDKELRRIPIIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLIENNILNYDFDLVASDPSDANTNSATFFSDDTDDKSKRSTNPEAGISIQQEQAGISIQQEQEASIATAAAVIEEHPYARASEYQPDVPGISDRRRTGPKKSELRIGESSAFFTYVKATTMKSNLEEIAHFDNSGTSQVRVENMNQACSQQGGNDLIRHENGETIESQSQDDLPRSNSIPDSFSVERSCTPPASMEVSQQNSNHKEEHPQGVVHPRNEIYGSELNQSGMPAQHAYPYYMSGAANHVMMQSSTQMYQKNIQNLQSHVSSSMIAQYNQQLLQCPPHATGMTPFPYFPMSICLQTGQVSTAHPWPSLGSSTSCEANLRKVDRREAALMKFRQKRKERCFDKKIRYVNRKQLAERRPRVRGQFVRKLNGINVDLNGQPASTDYDDEDEEEEENNDTRDSSPKDA* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4278 569 MobiDBLite consensus disorder prediction 184 207 - -
Mal5g4278 569 ProSiteProfiles CCT domain profile. 489 531 IPR010402 GO:0005515
Mal5g4278 569 SMART REC_2 33 148 IPR001789 GO:0000160
Mal5g4278 569 Gene3D - 33 244 - -
Mal5g4278 569 MobiDBLite consensus disorder prediction 326 359 - -
Mal5g4278 569 Pfam CCT motif 489 531 IPR010402 GO:0005515
Mal5g4278 569 Pfam Response regulator receiver domain 35 146 IPR001789 GO:0000160
Mal5g4278 569 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 554 IPR045279 GO:0009736
Mal5g4278 569 MobiDBLite consensus disorder prediction 240 262 - -
Mal5g4278 569 ProSiteProfiles Response regulatory domain profile. 34 152 IPR001789 GO:0000160
Mal5g4278 569 MobiDBLite consensus disorder prediction 536 569 - -
Mal5g4278 569 SUPERFAMILY CheY-like 29 158 IPR011006 -
Mal5g4278 569 MobiDBLite consensus disorder prediction 545 559 - -
Mal5g4278 569 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 2 554 - -
Mal5g4278 569 MobiDBLite consensus disorder prediction 248 262 - -
Mal5g4278 569 MobiDBLite consensus disorder prediction 324 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4278 Mal-Chr5 113879506 113883676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4278 22 568 Response Regulator Gene Family AT5G61380 49.361 6.15e-178 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mal5g4278 Response_reg 2.4e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4278 K12127 - gmx:100786522 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4278 5 113879506 113883676 Mal5g4278 5 113879506 113883676 ECH