Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4240 ATGGAGGGAGGAGATGATCTCCACCACCATCACCACCACCAACACCATCAACACCACCACCAACAACAACAGCAACAGCGACAAAATTTCCCATTCCAGCTTCTTGAGAAGAAAGAAGATAACCAAGAAGCAGCATCATGTTCAACTTCTTCACCATATCCATCTCTAGCAATCTCACCAATAGAACCAAGTACATCAAATTCAAACCGATCCAACCAATTAGTACCAGCTGCAACACCAACAACCTCTGACCCTGCCAACAAAAAACCACCTCCCAAACGAACCTCCACCAAAGACCGTCACACCAAGGTAGAAGGCCGTGGCCGCCGCATCCGAATGCCGGCACTATGCGCTGCTAGAGTTTTCCAGCTAACACGCGAACTTGGCCATAAATCCGACGGTGAAACCATTGAATGGCTTCTCCAACAAGCTGAACCAGCTGTTATAGCCGCCACCGGAACTGGAACTATACCTGCTAACTTCACATCTCTCAATATCTCACTTCGTAGCTCTGGTTCTTCCATGTCTGTTCCTTCTCAGCTAAGATCTTCTTACTTCAACCCCAATTTCTCACTTCAACAACGCAGAACTCTTTTCCCTGGAATTGGTTTATCTCCTTCAGAAAACAACAGCAACAACAACAACACTTCAATGCTTCTTAATTTCCAATCAAATAATCTAACAAACATGTTGCAGGCTAAACAAGAGGTTCGAGATGGAAACGCAAACGCAAACGCGCCTTCTTCATCAACAACGTTGGATTTATCAGAAACAAGTGGAGAAGAATCCATGGGAGGAAGAAAAAGAAGAACTAGCAGTGGTGGTAGTGAGCAAGATTTATCATCATTACAACATCAAATGGGGAGTTATCTGATGCAATCAAGTGCAGGTTCAATTCCGGCGAGTCATACTCAGATTCCGGCGAATATATGGATGGTGGCGAATTCTAATAACCAAATAATGAGTGGTGGTGATCCAATATGGACTTTTCCGTCGGTGAATAATAGTGCTGCTGCTTTGTATAGAGGAGCAGTTTCAACAAGTGGTTTGCATTTTATGAATTTTCCACAACCTATGGCTTTGTTGCCAGGTCAACAATTAGGTAATTCTTCTGGAGGTGGTGGTGGTGGTGGGAATATGAATATGAATATGAATATGAATGAAGGTCATTTGAGTATGCTTGCTGGTCTTAGTCCGTATCGTCCAGTTTCTGATCATCATCAACAACATCAACCAAGTGGATCACAATCACATCATCATCATCGCAGTGGTAGCCATGAACACGATGATCGACATGATAATTAA 1305 0.4345 MEGGDDLHHHHHHQHHQHHHQQQQQQRQNFPFQLLEKKEDNQEAASCSTSSPYPSLAISPIEPSTSNSNRSNQLVPAATPTTSDPANKKPPPKRTSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFNPNFSLQQRRTLFPGIGLSPSENNSNNNNTSMLLNFQSNNLTNMLQAKQEVRDGNANANAPSSSTTLDLSETSGEESMGGRKRRTSSGGSEQDLSSLQHQMGSYLMQSSAGSIPASHTQIPANIWMVANSNNQIMSGGDPIWTFPSVNNSAAALYRGAVSTSGLHFMNFPQPMALLPGQQLGNSSGGGGGGGNMNMNMNMNEGHLSMLAGLSPYRPVSDHHQQHQPSGSQSHHHHRSGSHEHDDRHDN* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4240 434 MobiDBLite consensus disorder prediction 396 434 - -
Mal5g4240 434 MobiDBLite consensus disorder prediction 240 281 - -
Mal5g4240 434 ProSiteProfiles TCP domain profile. 97 151 IPR017887 -
Mal5g4240 434 MobiDBLite consensus disorder prediction 240 259 - -
Mal5g4240 434 MobiDBLite consensus disorder prediction 1 107 - -
Mal5g4240 434 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 433 IPR005333 GO:0003700
Mal5g4240 434 Pfam TCP family transcription factor 95 262 IPR017887 -
Mal5g4240 434 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 18 433 - -
Mal5g4240 434 MobiDBLite consensus disorder prediction 420 434 - -
Mal5g4240 434 MobiDBLite consensus disorder prediction 44 90 - -
Mal5g4240 434 MobiDBLite consensus disorder prediction 91 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4240 Mal-Chr5 113326344 113327648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4240 86 366 TCP Transcription Factor Family AT3G47620 48.830 1.37e-65 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal5g4240 TCP 5.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4240 - - cam:101512124 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4240 5 113326344 113327648 Mal5g4240 5 113326344 113327648 ECH
Mal6g2440 6 57761373 57762629 Mal5g4240 5 113326344 113327648 PCT