Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4238 ATGGGATCAGAGAGTATTGCTCCGATGGTTGAGACTTCAAAAACCAGGTCTTCTCCTGGTATAATGAACCAAGGGCAAGGGAAAGTCCCTAAGAGAATTCACAAGGCCGAAAGGGAGAAAATGAAACGTGAACACTTGAACGAACTCTTTATTGATCTTGCCAATGCTCTTGATCTCAATGAGGCGAACAATGGAAAGGCTTCAATACTGATTGAAGCTTCTAAACTGCTAAAGGACTTGCTCTGTCAGATCCAGTCCCTAAAGAAGGAGAATGTCTCTTTATTGTCTGAATCTCATTATGTGACCATGGAGAAAAATGAGCTGAAGGAGGAGAATAGTAGCCTAGAAACTCAAATTGAGAAGCTTCAAGGTGAGATACAGGCAAGAATAGCTCAATCTAAACCTGACCTGAATGTGCCTCCTCAATTGGAGCTTGAGTCACCAGAGCAGACAACATTTCCAGGACAGAGTTTCCAACTGCCTACCATAGATCCTACCTTGCAGCAAGGACCTGCTGTTTTTGTCGTCCCCTTTCGTCCCGATCTTCAAGCTGCTTTCCCAGCTCCTAATGTTACCGAGATCACGCCAAATCCTACACTTGTTATCAGTAAACCTCATGCCAGGTATCCCACACCAGCAGATTCATGGCCATCACAACTGCTTGGAGAGCAACCAACTTCTAGATAA 687 0.444 MGSESIAPMVETSKTRSSPGIMNQGQGKVPKRIHKAEREKMKREHLNELFIDLANALDLNEANNGKASILIEASKLLKDLLCQIQSLKKENVSLLSESHYVTMEKNELKEENSSLETQIEKLQGEIQARIAQSKPDLNVPPQLELESPEQTTFPGQSFQLPTIDPTLQQGPAVFVVPFRPDLQAAFPAPNVTEITPNPTLVISKPHARYPTPADSWPSQLLGEQPTSR* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4238 228 MobiDBLite consensus disorder prediction 1 24 - -
Mal5g4238 228 PANTHER TRANSCRIPTION FACTOR BHLH47 9 227 - -
Mal5g4238 228 Gene3D - 28 104 IPR036638 GO:0046983
Mal5g4238 228 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 28 96 IPR036638 GO:0046983
Mal5g4238 228 Coils Coil 105 132 - -
Mal5g4238 228 PANTHER TRANSCRIPTION FACTOR BHLH47 9 227 - -
Mal5g4238 228 Coils Coil 70 97 - -
Mal5g4238 228 MobiDBLite consensus disorder prediction 1 32 - -
Mal5g4238 228 MobiDBLite consensus disorder prediction 205 228 - -
Mal5g4238 228 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 30 80 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4238 26 224 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 52.995 1.59e-61 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4238 - - mtr:MTR_4g108360 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4238 5 113291464 113292988 Mal5g4238 5 113291464 113292988 ECH