Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4233 ATGGGAAATTGCTTTGGAAGTCGTTACAAGGTTAAAGAACCTTTCAGCTCCCAACCCAATTCTGATGTTATAAAAGTTCCTCTTAGAAGCACTCAGTTGTTAGCTCATTCAAGTGCAACAGTACATGGATACAGTGATGGAGGTAAACCTGAGATTCTCCCAACTCCAAGATCTGAAGGGGACATACTTTCTTCTCCACATTTAAAAGCCTTCACATTTAAGGATCTTAGGAATGCCACTAAAAATTTCAGTAATGATAGTTTAATTGGACAAGGAGGGTTTGGTTATGTTTATAAAGGATGGATTGATGGTCAATCACTTAAGGCTGCAAAGCCTGGATTTGGAACTGTTGTAGCTGTCAAGAAGCTTAAGCCTGAAGGTTTTCAAGGTCATAAGGAGTGGCTGTCTGAACTCAATTATCTTGGCCAACTTCATCATCCAAATCTTGTCAAACTTACTGGATACTGCCTAGATGGGGATAACAGGCTTCTAGTCTATGAGTACATGCCTAATGGAAGCTTGGAAAATCATCTATTTCGCAAGGGCACACAACTACTTCCTTGGGCAACAAGAATCAAAGTTGCGATTGGTGCTGCTCGAGGTCTCACCTTCCTACATGACTCTAATCAACAAATTATCTACCGTGATTTCAAGGCTTCTAATATTTTATTAGACTCGGAATTTAATGCAAAACTGTCAGACTTTGGATTGGCCAAAGCAGGGCCCACTGGTGATCGTTCTCATGTTTCTACTCAAGTCCTGGGCACTCAAGGCTATGCTGCTCCTGAATATATTGCCACAGGTCGGCTGACAACAAGGTGCGATGTCTATAGCTTCGGGGTTGTGCTATTGGAACTACTATCAGGGCGCAATGCTGTCGATAAAGCAAAATCAGGAGCGGAACATAATCTTGTAGATTGGGCAAGACCGTATTTGGGCAATAGAAGAAAGTTGTTTCGGATTATGGACACAAGATTAGAAGGGCAGTATCCACAAAGAGCAGCTTATACAGCTGCAATTCTTGCATTACAATGTATTAGTGAGGCCAAGTTTAGACCACAAATGTCTGAGGTTTTGACTACTTTGGAAAAATTGCCAGTCATTAGACATTCAGCTAGTCCTTCTAGATTTGAGGAGAAACCGATCCCGAGTCAAATGAGAGAAAGAGTTTGA 1173 0.4152 MGNCFGSRYKVKEPFSSQPNSDVIKVPLRSTQLLAHSSATVHGYSDGGKPEILPTPRSEGDILSSPHLKAFTFKDLRNATKNFSNDSLIGQGGFGYVYKGWIDGQSLKAAKPGFGTVVAVKKLKPEGFQGHKEWLSELNYLGQLHHPNLVKLTGYCLDGDNRLLVYEYMPNGSLENHLFRKGTQLLPWATRIKVAIGAARGLTFLHDSNQQIIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRSHVSTQVLGTQGYAAPEYIATGRLTTRCDVYSFGVVLLELLSGRNAVDKAKSGAEHNLVDWARPYLGNRRKLFRIMDTRLEGQYPQRAAYTAAILALQCISEAKFRPQMSEVLTTLEKLPVIRHSASPSRFEEKPIPSQMRERV* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4233 390 Gene3D Transferase(Phosphotransferase) domain 1 169 377 - -
Mal5g4233 390 Gene3D Phosphorylase Kinase; domain 1 55 168 - -
Mal5g4233 390 Pfam Protein tyrosine and serine/threonine kinase 87 358 IPR001245 GO:0004672|GO:0006468
Mal5g4233 390 PANTHER BNAC02G17010D PROTEIN 30 378 - -
Mal5g4233 390 SUPERFAMILY Protein kinase-like (PK-like) 61 363 IPR011009 -
Mal5g4233 390 ProSiteProfiles Protein kinase domain profile. 83 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4233 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Mal5g4233 390 CDD STKc_IRAK 89 365 - -
Mal5g4233 390 PANTHER OS01G0588500 PROTEIN-RELATED 30 378 - -
Mal5g4233 390 ProSitePatterns Protein kinases ATP-binding region signature. 89 122 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4233 Mal-Chr5 113214993 113218586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4233 69 384 Glycoside Hydrolase AT3G07070 51.090 1.10e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal5g4233 PK_Tyr_Ser-Thr 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4233 - - gmx:100791844 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4233 5 113214993 113218586 Mal5g4233 5 113214993 113218586 ECH