Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4229 ATGATTGGTCTCACAGAGCCATCATCTGGTGCAGCATATGTTCAAGGCATGGACATTAGAACTCAAATGAATGGAATATATACTAACATGGGAGTATGCCCACAGCATGACTTGCTTTGGGAATGCTTGACAGGCAGAGAGCACCTACTTTTCTATGGCAGACTTAAAAATCTTAAAGGTTCAGTCTTGACAAAAGCAGTAGAAGACTCTTTGAAGAGTTTAAACCTTTTCCATGGAGGTGTTGCTGATAAACAAGCTGGAAAATACAGTGGAGGGATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGGGACCCCAAAGTTGTTTATATGGATGAGCCAAGTACTGGACTAGACCCTGCTTCTAGGAAATGCCTATGGAATGTTATCAAGCTTGCGAAACAAAATCGTGCAATCATTCTGACCAGAACTTATGTGTTCACAATGACAACATCTTCCGATCACGAGAAGGATGTGGAGAGCCTCGTACATCAACTCACCCCAAATGCCAAAAAGATATACCGTCTCTCTGGTACCCAGAAATTTGAGCTGCCAAAAGAGGATGTTAAAATAGCAAATGTATTCCAAGCTGTTGAAATTGCAAAAAGAAACTTCACTGTTTTTGCATGGGGTTTAGCTGACACAACATTAGAAGATGTCTTCATTAAGGTAGCACGCAAGGCTCAGGCATTTGATAAGTTGTCATAA 711 0.4107 MIGLTEPSSGAAYVQGMDIRTQMNGIYTNMGVCPQHDLLWECLTGREHLLFYGRLKNLKGSVLTKAVEDSLKSLNLFHGGVADKQAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQNRAIILTRTYVFTMTTSSDHEKDVESLVHQLTPNAKKIYRLSGTQKFELPKEDVKIANVFQAVEIAKRNFTVFAWGLADTTLEDVFIKVARKAQAFDKLS* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4229 236 Gene3D - 1 181 IPR027417 -
Mal5g4229 236 PANTHER OS08G0398300 PROTEIN 145 233 - -
Mal5g4229 236 PANTHER OS08G0398300 PROTEIN 1 143 - -
Mal5g4229 236 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 145 233 IPR026082 GO:0016021|GO:0055085|GO:0140359
Mal5g4229 236 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1 143 IPR026082 GO:0016021|GO:0055085|GO:0140359
Mal5g4229 236 Pfam ABC transporter 1 116 IPR003439 GO:0005524
Mal5g4229 236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 155 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4229 Mal-Chr5 113186194 113188345 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4229 6 142 Calmodulin-binding Proteins AT2G36910 24.490 7.44e-06 44.7