Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4227 ATGGTAGCAAATTCTTCCAGCTTCTGGACTCAAGCAAACGCTCTTCTCAGAAAGAATTTAACCTTCCAGAAACGGAACGTGAAGACCAACATTCAGTTGATTCTGTTGCCGTTGGTCCTTTGTGTTGTGCTTGTTGTTCTTCAAAATTTAATCGATTCTCAATTGGATTCACCAGATTTTAAATGCGGTTGTGCATGTCCTAATAAAAGAAAAACATGTAGCGATTCAGAGAAGGTTTGTGGGGTCCAGTATTCTGATGAGACTCAGATTCTATCATGTGCTGTTCCTAATCCACCTGAATGGCCTCCTCTCTTGCAACTTCCAGGCGTGTTTTGCAAGGAAAATGGTTCCTGTCCTTTTAACATGCTTTTCACCGCCGACAATCGCTCCTTTGGACAGAGTATGTCTGATAATATGTTCCCAAGTGCCACCACTCTGAATTACTCTGATATCATGGGTAGTTTGGCATCAAATGTGTTGGGATCTCAATCATATCCTGCGGAAAACAATTTTCTTGAACCTGCTTTTTTGTCGGGTCTTCCCATTTTTTATCTACAAACTCAGTGCCCTCAGAACAACTCTGGATTCTCATTTCCTTACCAGATGGCAGGCGTTACTTTACAGCAAGAAATAAGATGTGGTCAAGGTATAAATCTTTGGCGTGACAGTTCTTCTGATATCAACAATGAGTTATATAAAGGACGGACCAATGAGATAGTTTCAGCTTTTGATTTTCTAAATTCAAATGAGGATGGATTCAATATCGCTGTATGGTACAAGTCAGCCTTCAGGCGTAGCACAAGTTCTCGTCCTACTATGTTGCGGATTCCTCGTTCTGTAAATTTGATATCCAATGCCTACTTGCAGTTTCTGCGTGGACCCGGTACCAAAATGTTATTTGAGTTTGTAAAGGAAATGCCAAAATCTGAGACCGTATTTAGACTTGAGATAGCTTCTCTCCTGGGCGGTCTGTTCTTCACTTGGGTCGTCCTGCAACTTTTTCCGGTTGTTCTGACATCACTTGTTTATGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCATGGTCTTGGTGACGGGCCATATTGGTTGATTTCATATGGATATTTTCTTGCCTTATCAGCGATCTACATGTTGTGTTTTGTAATATTCGGCTCAGTCTTAGGATTAAAATTCTTCACCTTGAATGACTACAGCATCCAATTCGTGTTTTATTTCATCTTTATAAACTTACAAATTTCAATGGCATTTCTGTTGTCTTCCTCTTTTTCAAATGTTAAGACCGCTACAGTAACCGCATATTTTGGCGTCTTTGGAACCGGGCTATTAGGCGGCTTTCTTTTCCAATATTTTGTTGAAGCTTCATCATTTCCTAGAGAATGGATCATTTGTATGGAGTTGTATCCCGGGTTCGCTTTATATCGTGGGTTATATGAGTTTTCACAGTCTGCCACCAATGGTAGTAATTCGGGGACTGATGGTATGCTGTGGCAGGATCTGAGCGATAGCGCCAATGGCATGAAAGAGGTCTTAATTATCATGTTTGCTGAGTGGATCACAGTGCTTTTTGCTGCTTATTACATCGATCAAGTATTGTCGACAGGAAGTGGAAAAAGTCCTCTTTTCTTCTTGAAAGGATTTCAGAAAAAACCTCCATCATTAAAGAACCTCAGTATTCAAAGGCAGGGGTCAAAAGTTTTGTTAGAGATGGAGAAAGCAGATGTCATCAGAGAGAGGGAGAAGGTGGAGCAGTTACTTCTTGAACCTACCATTAATCATGCAATTGTTTGCGACGACCTCAAAAAGTTCTATCCAGGAAGGGATGGAAATCCAGGGAAATTCGCAGTGAAAGAATTGTTCCTTGCTGTGCCTCGAGGGGAATGCTTCGGTATGCTTGGTCCTAATGGTGCTGGGAAGACTTCTTTCATTAGTATGATGATTGGTCTCACAAAGCCAACATCTGGTGCGGCTTATGTTCAGGGCCTGGACATCAGAACTCACATGGATGGAATATATACCAGCATGGGAGTATGCCCACAGCATGACTTGCTGTGGGAAAGCTTGACAGGTAGAGAGCACCTACTTTTTTATGGCAGACTAAAAAATCTTAAAGGTTCAGTTTTGACTCAAGCAGTAGAAGAATCTTTGAAGAGTTTAAATCTTTTCCATGGAGGGGTTGCTGATAAAAAAGCTGGAAAATACAGTGGAGGGATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATCGGGGACCCTATAGTTGTTTATATGGATGAGCCAAGTACTGGATTAGACCCTGCTTCAAGGAAACTCCTATGGAATGTTATCAGGCTTGCGAAACAAGATCGTGCAATCATTCTGACAACACATTCTATGGAAGAGGCAGAGGCGTTATGTGATCGATTAGGAATTTTTGTCGATGGTAGCTTGCAGTGCGTAGGAAATCCAAAGGAGTTGAAAGGAAGATATGGAGGAACTTATGTGTTCACAATGACAACATCTTCCGATCACGAGAAGGATGTGGATAACCTGGTACGTCAACTCACCCCAAATGCCAACAAGATATACCGTCTTTCCGGAACCCAGAAATTTGAGCTGCCTAAAAAGGATGTTAAAATAGCAAATGTATTCCAAGCTGTTGAAATTGCAAAAAGAAACTTCACTGTTTTTGCATGGGGTTTAGCTGACACCACATTAGAAGATGTCTTTATTAAGGTAGCACGCGAGGCTGAGGCATTTGATACATTGTCATAA 2757 0.4113 MVANSSSFWTQANALLRKNLTFQKRNVKTNIQLILLPLVLCVVLVVLQNLIDSQLDSPDFKCGCACPNKRKTCSDSEKVCGVQYSDETQILSCAVPNPPEWPPLLQLPGVFCKENGSCPFNMLFTADNRSFGQSMSDNMFPSATTLNYSDIMGSLASNVLGSQSYPAENNFLEPAFLSGLPIFYLQTQCPQNNSGFSFPYQMAGVTLQQEIRCGQGINLWRDSSSDINNELYKGRTNEIVSAFDFLNSNEDGFNIAVWYKSAFRRSTSSRPTMLRIPRSVNLISNAYLQFLRGPGTKMLFEFVKEMPKSETVFRLEIASLLGGLFFTWVVLQLFPVVLTSLVYEKQQKLRIMMKMHGLGDGPYWLISYGYFLALSAIYMLCFVIFGSVLGLKFFTLNDYSIQFVFYFIFINLQISMAFLLSSSFSNVKTATVTAYFGVFGTGLLGGFLFQYFVEASSFPREWIICMELYPGFALYRGLYEFSQSATNGSNSGTDGMLWQDLSDSANGMKEVLIIMFAEWITVLFAAYYIDQVLSTGSGKSPLFFLKGFQKKPPSLKNLSIQRQGSKVLLEMEKADVIREREKVEQLLLEPTINHAIVCDDLKKFYPGRDGNPGKFAVKELFLAVPRGECFGMLGPNGAGKTSFISMMIGLTKPTSGAAYVQGLDIRTHMDGIYTSMGVCPQHDLLWESLTGREHLLFYGRLKNLKGSVLTQAVEESLKSLNLFHGGVADKKAGKYSGGMKRRLSVAISLIGDPIVVYMDEPSTGLDPASRKLLWNVIRLAKQDRAIILTTHSMEEAEALCDRLGIFVDGSLQCVGNPKELKGRYGGTYVFTMTTSSDHEKDVDNLVRQLTPNANKIYRLSGTQKFELPKKDVKIANVFQAVEIAKRNFTVFAWGLADTTLEDVFIKVAREAEAFDTLS* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4227 918 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 596 833 IPR003439 GO:0005524
Mal5g4227 918 Gene3D - 588 859 IPR027417 -
Mal5g4227 918 SMART AAA_5 626 809 IPR003593 -
Mal5g4227 918 Pfam ABC-2 family transporter protein 315 527 - -
Mal5g4227 918 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 5 918 - -
Mal5g4227 918 Pfam ABC transporter 619 762 IPR003439 GO:0005524
Mal5g4227 918 Coils Coil 569 589 - -
Mal5g4227 918 ProSitePatterns ABC transporters family signature. 735 749 IPR017871 GO:0005524
Mal5g4227 918 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 5 918 IPR026082 GO:0016021|GO:0055085|GO:0140359
Mal5g4227 918 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 595 824 IPR027417 -
Mal5g4227 918 CDD ABC_subfamily_A 600 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4227 Mal-Chr5 113169743 113178187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4227 605 844 Calmodulin-binding Proteins AT2G36910 23.482 1.92e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4227 - - gmx:100805474 1355.89