Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4225 ATGGACAGCACCTTGAAGATTCATAAAACACCAAAAGATCTTTCATCTTCTGTGCTTATGCCACTAGCAAGAATAGAAGAAGGAACTAAAAGGGAAATTCAACGTTCAGATAAAGAAAACAAAGGAGGATGGATCATTTGTATGGAGTTGCATCCTGGGTTTGCTTTATATCGTGGGTTATATGAGTTTGCACAGTTTGCCTCTAGTGGCAGTAATTTGGGGACTGATGGTATGCAGTGGAAGGATCTGAATGATGGCGTCAATGGCATGAAAGATGTCCTAATTATCATGTTTTCTGAGTGGATAGTAGTGCTTTTTGTTGCTTATTACATCGACCAAGTATTGTCAACAGGAAGTGGGAAAGGTCCTCTATTTTTCTTGAAAGGATTTCAGAAAAAACCACTTCCATCATTGAAAAAGCCCAGTATTCAAAGGCAAGGGTCAAAAGTTTTCGCTCAGATGGAGAAACCTGATGTCATCCAAGAGAGGGAGAAGGTCAAGCAGCTGCTACATGAACCAACCATTAATCATGCAATTGTTTGTGACAACCTAAAAAAATTCTATCCAGGAAGGGATGGAAATCCAGGGAAATTTGCAGTGAGAGAATTGTTCCTTGCTGTTCCTCGAGGGGAATGCTTCAGTATGCTTGGTCCTAATGGTGCTGGGAAGACTTCTTTTATCAGTATGATGATTGGTCTCACAAAGCCAACATCTGGTGCAGCATATGTTCAGGGCCTGGACATTAGAACTCATATGGATGGGATATATACTAACATGGGAGTATGCCCACAGCACGACTTGCTGTGGGAAAGCTTGACAGGTAGAGAGCACCTACTTTTTTATGGAAGACTTAAAAACCTTAAAGGTTCAATCTTGACTCAAGCAGTAGAAGAATCTTTGAAGAATTTAAACCTTTTCCATGGAGGGGTTGCTGATAAACAAGCTGGAAAATACAGTGGAGGGATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGGGACCCCAAAGTAGTTTATATGGATGAGCCATGTACTGGATTAGACCCTGCTTCTAGGAAATGCCTATGGAATGTTATAAACCTTGCGAAACGGGACCGTGCAATTGTTCTGACTACACATTCTATGGAAGAGGCAGAAGCCTTGTGTGATCGATTAGGAGTATTTGTAAATGGTAGCTTGCAATGCATAGGAAATCCAAAGGAGCTGAAAGGCAGATATGGAGGAACTTATGTGCTCACAATGACAACATCTTCGGATCACGAGAAGGATGTGGAGAACATTGTACAACTGCTCACCCCAAAGGCCAACAAGATATACTGTCTTTCTGGTACCCAGAAATTTGAATTGCCAAAAGAGGATGTTAATATAGCGAATGTATTTCAAGTTGTTGAAGTTGCAAAAAGAAACTTCACTGTTTTTGCATGGGGTTTAGCTGACACAACATTGGAAGATGTCTTCATTAAGGTAGCACGTGAGGCTCAGACATTTGATACATTGCCATAA 1506 0.4097 MDSTLKIHKTPKDLSSSVLMPLARIEEGTKREIQRSDKENKGGWIICMELHPGFALYRGLYEFAQFASSGSNLGTDGMQWKDLNDGVNGMKDVLIIMFSEWIVVLFVAYYIDQVLSTGSGKGPLFFLKGFQKKPLPSLKKPSIQRQGSKVFAQMEKPDVIQEREKVKQLLHEPTINHAIVCDNLKKFYPGRDGNPGKFAVRELFLAVPRGECFSMLGPNGAGKTSFISMMIGLTKPTSGAAYVQGLDIRTHMDGIYTNMGVCPQHDLLWESLTGREHLLFYGRLKNLKGSILTQAVEESLKNLNLFHGGVADKQAGKYSGGMKRRLSVAISLIGDPKVVYMDEPCTGLDPASRKCLWNVINLAKRDRAIVLTTHSMEEAEALCDRLGVFVNGSLQCIGNPKELKGRYGGTYVLTMTTSSDHEKDVENIVQLLTPKANKIYCLSGTQKFELPKEDVNIANVFQVVEVAKRNFTVFAWGLADTTLEDVFIKVAREAQTFDTLP* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4225 501 ProSitePatterns ABC transporters family signature. 318 332 IPR017871 GO:0005524
Mal5g4225 501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 179 416 IPR003439 GO:0005524
Mal5g4225 501 PANTHER OS08G0398300 PROTEIN 40 498 - -
Mal5g4225 501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 407 IPR027417 -
Mal5g4225 501 CDD ABC_subfamily_A 183 404 - -
Mal5g4225 501 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 40 498 IPR026082 GO:0016021|GO:0055085|GO:0140359
Mal5g4225 501 Gene3D - 166 439 IPR027417 -
Mal5g4225 501 SMART AAA_5 209 393 IPR003593 -
Mal5g4225 501 Pfam ABC transporter 204 345 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4225 Mal-Chr5 113143651 113147946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4225 183 427 Calmodulin-binding Proteins AT2G36910 24.603 1.90e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4225 - - gmx:100805474 757.673