Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4224 ATGGGTAAATCACCAGGAAAATGGATCAAAACTGTACTGTTTGGGAAGAAGTCATCCAAATCAAATATACCAAGAGGAAGAGAGCTTGTTAATCAAAAGGATGGAGTTGTTGCTTCCAAGGTTCCAGAGACGACTGGTTTAGCTTTTGAGCCAACCTCCAACACTACTGCCACACATGAGGAAGACCTGGAGTTGGAGAATAAAGAAGCAGAAAATGTTTTACCTGGAAATCAAGAAATTGACACATTCGTACCTATTGATCAAGATGCACCACTTGATCCAGAGAAAATGAAGCTGGAGGAGGCAGCTACAAAAGCACAGGCTGCTTTCAGAGGTTATTTGGCTAGGAGAGCATTCAGAGCCCTAAAAGGCATAATAAGGTTACAAGCACTTATTCGCGGGCACTTGGTTAGAAGACAAGCTGTTGCTACATTGTGCTGTATGTATGGAGTTGTCAAATTACAAGCACTTGTTCGTGGACAAAGAGATAGAAAGTCTGATGTTGGATTTGAAATTCACGAGAAGTGCAATCTATTGAAGCTTCAGGGTGACAACAAACCTGTCAAGCCAATTGCCATATCTGGTAAAATTATGAAGCTGTCAGCAAATACTTTCACCCGCAAGCTTATTGCTTCATCAACTACAATTATGGCCCTGCGTTTGCAATATGTTCGTGGTGATCCAAATTCAGTCCTTAGTTGGTCGGAGCGCTGGTCAGCATCTCGGTTTTGGAAGCCAATTCCCCAACCCAAGAAAACTCGGGATACCAAGTCTCAGAAAAAGCAGGGTATTACTTCAACCGGAGATGCTCAAAGCAAGTCTAAACGTACCCACAGGAAGCTTCCTACTGCAAATTTTGACCTTACCCCAGCACAAGCAAATCCTGAATTTGAAAAACCAAAACGAAATGTAAGGAAATTTCCAACCCAACCCTCTGAATCTGTGCTGGAAAATCCACAAATTGAGCTTGAGAAGGTTAAACGTAACTTGAGAAAGGTTCATAACCCAGTGGTTGAGACTGCAGTTCTGTCAGAAGTTGAATCTGAGACTCCTAAGCCTCAAGTGGAAAAGGAAACAGTTGCCTCAAGTGTTGGTGTTTCAGAACATCCGGTCATTAGTTCTAATGGAATAATTAAGAAGGAAGCAGCATTAACCATTTCCAGTGAGCCAGATATTGGAATTACTCCTGGAGATTTAGTTACTAAGGAGGTGTTTGACACTCCAAGTAGTTATCAGGTGAATTTGGAATCAAAGCCCTTGACAGATATTACAGGGAAAGATAAAAACATTTCTGATGATGAAGTTAAAGATGAACCCATCGATTTAGCAGAGACTGTTTGCAAAGATGAAAATTCTCACTTAACAAACGGAGATTTGAATAACAAGGAAGATCAAACAGGCAGTGAAAACCAGAAACCAACCCGAAAAGCCTCAATTTTAGCAAAGCAGGAACGTGCAGAGAACGGTTTACATAATAGTCCGACAATACCGAGTTATATGGCAGCAACTGAATCTGCAAAGGCAAAATTGAGGGCTCAAGGATCCCCAAAAGTCGTACAAGATGGAAGTGAGAAAAACAACAATGCTCGGCGATATTCCCTGCCATCTTCAACTAACAGCAAAATCAGTTCACATTCACCAAGGACACAGAGACCAGTTCATTCAGGTGGTAAAGGGGGCCACAAAAGTGACAAAGCTGTATCTTCTTCTAGAGAGGGAAATGGAAAGGTAGTTCAAGCAGAATGGAAGAGGTGA 1755 0.4177 MGKSPGKWIKTVLFGKKSSKSNIPRGRELVNQKDGVVASKVPETTGLAFEPTSNTTATHEEDLELENKEAENVLPGNQEIDTFVPIDQDAPLDPEKMKLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLCCMYGVVKLQALVRGQRDRKSDVGFEIHEKCNLLKLQGDNKPVKPIAISGKIMKLSANTFTRKLIASSTTIMALRLQYVRGDPNSVLSWSERWSASRFWKPIPQPKKTRDTKSQKKQGITSTGDAQSKSKRTHRKLPTANFDLTPAQANPEFEKPKRNVRKFPTQPSESVLENPQIELEKVKRNLRKVHNPVVETAVLSEVESETPKPQVEKETVASSVGVSEHPVISSNGIIKKEAALTISSEPDIGITPGDLVTKEVFDTPSSYQVNLESKPLTDITGKDKNISDDEVKDEPIDLAETVCKDENSHLTNGDLNNKEDQTGSENQKPTRKASILAKQERAENGLHNSPTIPSYMAATESAKAKLRAQGSPKVVQDGSEKNNNARRYSLPSSTNSKISSHSPRTQRPVHSGGKGGHKSDKAVSSSREGNGKVVQAEWKR* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4224 584 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Mal5g4224 584 PANTHER PROTEIN IQ-DOMAIN 31 1 571 - -
Mal5g4224 584 Pfam Protein of unknown function (DUF4005) 483 563 IPR025064 -
Mal5g4224 584 SMART iq_5 98 120 IPR000048 GO:0005515
Mal5g4224 584 SMART iq_5 121 142 IPR000048 GO:0005515
Mal5g4224 584 MobiDBLite consensus disorder prediction 447 584 - -
Mal5g4224 584 ProSiteProfiles IQ motif profile. 123 145 IPR000048 GO:0005515
Mal5g4224 584 MobiDBLite consensus disorder prediction 245 315 - -
Mal5g4224 584 Gene3D - 96 145 - -
Mal5g4224 584 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Mal5g4224 584 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Mal5g4224 584 PANTHER IQ-DOMAIN 5-RELATED 1 571 - -
Mal5g4224 584 MobiDBLite consensus disorder prediction 449 477 - -
Mal5g4224 584 MobiDBLite consensus disorder prediction 519 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4224 Mal-Chr5 113109621 113114410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4224 1 584 IQD Protein Family AT1G74690 44.895 2.75e-132 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4224 - - gmx:100794636 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1907 6 40364372 40370217 Mal5g4224 5 113109621 113114410 ECH
Mal5g4224 5 113109621 113114410 Mal5g4224 5 113109621 113114410 ECH