Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4221 ATGGATTGCGGTTCAGCTGGGAGATCTGGTGATGGAGATAGTGGACACAAGGAAGATATGAGAAGTGAGCATAGTATTGGTGATGATCATGAAACTCATCATCATAAAAAGGAGACTATTGTTGAGGAACCACCCATTGCTAATAATACAGAACGATCAATTGAGGCTGGACCAAGCGCATCCTCTCCCAAAAATAATAAGGTTGAGGATCAGCTTGAGACAACAAAAGCCCAAATGGGTGAAGTGAGAGAAGAAAATCAACGGTTAAAAATGTGTCTCAACAAAATAATGACTGAATACCGAGCACTAGAAATGCAATTTCACAACATGGTTAAGCAAGAAACAAAAAAGAACATCAATGATAATAACCATGAAGAAATAAATGCAGAATCTGATCTTGTTTCCCTCAGCCTTGGAAGAGTTCCTAGTAACAATATTCCAAAATATGAAGAGAAAGTTAACAAAGTGTCTAAACTAGCATTGAATAATGATGATGAATTCAATAAGGAAGAGTTGTCACTTGGATTGGAATGTAAATTTGAAACATCAAAATCAGGTAGCACAACTGAAGGAGTACCAAATCCAAGTCCAGTGAATAGTTCTGAAGTAGTTCCTACAAAGGATGATGAAGTTGTGGAGACTTGGCCACCAAGTAAGGCACTCAATAAGACAATGAGAGATGCAGAGGAAGAAGTTGCTCAACAAACTCCTGCTAAGAAAGCTAGAGTTTGTGTTAGAGCAAGATGCGACACCCCAACGATGAATGATGGATGCCAATGGAGGAAATATGGACAAAAGATTGCGAAAGGAAATCCTTGCCCTCGAGCTTACTATCGGTGCACGGTTGCACCATCATGTCCAGTTAGAAAACAGGTGCAGAGATGTGTTGAGGACATGTCTATTCTAATCACAACATACGAAGGGACACACAACCACAGCCTTCCACTTTCAGCAACAGCCATGGCTTCCACAACTTCCGCGGCCGCATCGATGCTATTATCAGGTTCATCAACCTCCAACTCTGGTTCAATCCCCTCAACACAAACCAACAATAATCTTCATGGCCTAAACTTTTATCTACCAGATGGTTCAAAATCAAACCAACTTTACCTATCCAACCCTGCATTATCATCTCAACATTCACATCCAACTATAACTCTTGACCTCACTTCAAACCCATCAAATTCTTCAACATCATCACCCTTTGTTAGATTCAATTCAAGCTACAATAACAACAACCAATTACCAAGATACCCTTCTTCCACAAGTCTTAGCTTTAGTTCACCTGAATCAAATCCCATGCATTGGAACAGTTTCCTCAATTATGCTACTACTCAAAATCAACCATATAATAACAATAGGAACAATAATAATCTCAGCACTTTAAACTTTGGTAGACAAAATACAATGGAAAGTATATACCAAACCTACATGCAAAAAAACAACAATAACAACAATTCAAACATTTCTCAACATGATAGTACTATATCAGCGGCAACAAAAGCAATCACAGCAGATCCAACTTTTCAATCAGCTTTAGCTGCAGCACTTTCTTCACTTATTGGAAACACTAATCAAGGGAATCAAAATCAAGGTGGAGGAGAAAATTTGAGTCAGAAAATGAAATGGGCTGAGATGTTTCCTAGTTCTTCTAGTTCATTGCCTTCATCAAGTTCTAAAGTAAATGGTTGTGCTTCTAGTTTCTTGAACAAGACGTCACCAGTGAACAATACACAGACAACAAGTTTGATGTTGTTGTCTCCTTCTTTGCCATTTTCTACAACCAAAAGTGCATCTGCATCTCCTGGTGATAATAGTGAAAACACCAATTAA 1833 0.3852 MDCGSAGRSGDGDSGHKEDMRSEHSIGDDHETHHHKKETIVEEPPIANNTERSIEAGPSASSPKNNKVEDQLETTKAQMGEVREENQRLKMCLNKIMTEYRALEMQFHNMVKQETKKNINDNNHEEINAESDLVSLSLGRVPSNNIPKYEEKVNKVSKLALNNDDEFNKEELSLGLECKFETSKSGSTTEGVPNPSPVNSSEVVPTKDDEVVETWPPSKALNKTMRDAEEEVAQQTPAKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPSCPVRKQVQRCVEDMSILITTYEGTHNHSLPLSATAMASTTSAAASMLLSGSSTSNSGSIPSTQTNNNLHGLNFYLPDGSKSNQLYLSNPALSSQHSHPTITLDLTSNPSNSSTSSPFVRFNSSYNNNNQLPRYPSSTSLSFSSPESNPMHWNSFLNYATTQNQPYNNNRNNNNLSTLNFGRQNTMESIYQTYMQKNNNNNNSNISQHDSTISAATKAITADPTFQSALAAALSSLIGNTNQGNQNQGGGENLSQKMKWAEMFPSSSSSLPSSSSKVNGCASSFLNKTSPVNNTQTTSLMLLSPSLPFSTTKSASASPGDNSENTN* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4221 610 Coils Coil 65 85 - -
Mal5g4221 610 MobiDBLite consensus disorder prediction 52 68 - -
Mal5g4221 610 Gene3D WRKY domain 238 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g4221 610 MobiDBLite consensus disorder prediction 1 69 - -
Mal5g4221 610 MobiDBLite consensus disorder prediction 11 42 - -
Mal5g4221 610 MobiDBLite consensus disorder prediction 183 212 - -
Mal5g4221 610 MobiDBLite consensus disorder prediction 375 402 - -
Mal5g4221 610 SMART WRKY_cls 254 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g4221 610 MobiDBLite consensus disorder prediction 586 610 - -
Mal5g4221 610 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 30 606 - -
Mal5g4221 610 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 30 606 IPR044810 GO:0003700
Mal5g4221 610 SUPERFAMILY WRKY DNA-binding domain 247 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g4221 610 Pfam WRKY DNA -binding domain 255 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g4221 610 ProSiteProfiles WRKY domain profile. 249 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g4221 610 MobiDBLite consensus disorder prediction 183 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4221 Mal-Chr5 113079024 113083393 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4221 79 522 WRKY Transcription Factor Family AT5G15130 41.561 2.94e-87 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal5g4221 WRKY 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4221 - - pvu:PHAVU_003G192000g 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g0123 3 4344722 4348363 Mal5g4221 5 113079024 113083393 ECH
Mal5g4221 5 113079024 113083393 Mal5g4221 5 113079024 113083393 ECH