Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4215 ATGGCAAATAGAATTCTGTTTCGCGACAACACTGAAATTGGAGTGTTTTGTAAACTTACCAATACCTATTGTTTGGCTGGTATTGGAGGTTCCAATAGCTTCTACAGTGCAATTGAGGCTGAACTAGAAGATGTGATCCCTGTCATCAAAACCTCCGTCGGTGGCATTCCTAGTGTTGGTCGTTTTTGTATTGGAAACAGAAACGGGCTTCTCTTGCCCCATACAACCACATGCGAAGAATTGCAGCATATAAAAAGAAGTCTGCCTGATGGAGTTGTTGTTCAGATCATGCAAAAAGGATTGTCTTCTTATGGGAGATTTATTGCATGTAATGACCATGTGGCCCTTGCGCACACTGATCTTCACTGGGAGGCTAAGGAGTTGATCACAGATGTCCTTGGGGTAGAAGTTTTCGTGCCGGTAGATTCTGATAGTTTTTTTTCTGGAAGTTACTGTGCCTTATCCAACAGAGGTGGTTTGATCCACCCTCATGCTTCCAAAGAAGTCTTGGATGAGCTTTCTGCAGCTCTTGAAGTTCCTTTGGAACCTGGAACCGTCAATCGGGGCAGCCAAGCTATAGCTCCTGGCATGATAGTAAATGATTGGACAGCCTTTTGTGGTTCAAAAACCACAAGAGCAGAGCTCTGTGTGATGGATAGAGTTTTCAAGCTGAGGGAACCCTAG 684 0.443 MANRILFRDNTEIGVFCKLTNTYCLAGIGGSNSFYSAIEAELEDVIPVIKTSVGGIPSVGRFCIGNRNGLLLPHTTTCEELQHIKRSLPDGVVVQIMQKGLSSYGRFIACNDHVALAHTDLHWEAKELITDVLGVEVFVPVDSDSFFSGSYCALSNRGGLIHPHASKEVLDELSAALEVPLEPGTVNRGSQAIAPGMIVNDWTAFCGSKTTRAELCVMDRVFKLREP* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4215 227 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 226 - -
Mal5g4215 227 Pfam eIF-6 family 4 203 IPR002769 GO:0042256|GO:0043022
Mal5g4215 227 TIGRFAM eIF-6: putative translation initiation factor eIF-6 4 223 IPR002769 GO:0042256|GO:0043022
Mal5g4215 227 SUPERFAMILY Pentein 1 224 - -
Mal5g4215 227 PIRSF Transl_init_IF-6 1 226 IPR002769 GO:0042256|GO:0043022
Mal5g4215 227 Hamap Translation initiation factor 6 [eif6]. 1 227 IPR002769 GO:0042256|GO:0043022
Mal5g4215 227 SMART eIF6neu2 3 204 IPR002769 GO:0042256|GO:0043022
Mal5g4215 227 CDD IF6 4 223 IPR002769 GO:0042256|GO:0043022
Mal5g4215 227 Gene3D - 1 225 - -
Mal5g4215 227 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 226 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4215 Mal-Chr5 113008096 113013687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4215 1 226 Eukaryotic Initiation Factors Gene Family AT3G55620 63.274 1.52e-105 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4215 K03264 - thj:104808899 303.523