Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4214 ATGTTTCAGTGGGTTGGCGACTCCGAGAAGTACATCAAAGCAATTTTTTCACTGGCTAACAAGATTGCTCCGAGTGTTGTATTTATTGATGAGGTGGACAGCCTATTATCAAAACGTGGAAACAATAATATGAATGAAGTTCATAATAAAATGAAGATGGAATTTTTTGTCCACTGGGACGGTCTTCGTACACAAGAGGACAACCGCGTACTTGTTCTTGCTGCTACGAATAGACCGTTTGATCTCGATGAAGCTGTTATTAGGAGACTTCCAAGAAGGTTCATGGTTAGTCTGCCAGATGCTACAAACCGAGAGAAAATTCTCAAGAGTTTGTGTTCAACAGCTGCCCTTTGCCCATTCAGAGAGTTATTGGAAATAGAAAAGAAGGAGAGAGATTTAGCATTGGCTCAGGGAAAACCTTTACCTAGATTGCGTAGCAGTTCAGATAAACGCCCTTTAAATATGGAGGATCTTTTGTACGCACAGAAACAGGTTTGTGCTAGTGTTATGGCCGAGTCATCAACTATAGATGAACTGCTCCAATGGAATGATAGTTTTGGAGGAGGTGGAGGTAGATCTGGAAATGGTAGACATTTGAGCTATTATGTGTAG 612 0.4101 MFQWVGDSEKYIKAIFSLANKIAPSVVFIDEVDSLLSKRGNNNMNEVHNKMKMEFFVHWDGLRTQEDNRVLVLAATNRPFDLDEAVIRRLPRRFMVSLPDATNREKILKSLCSTAALCPFRELLEIEKKERDLALAQGKPLPRLRSSSDKRPLNMEDLLYAQKQVCASVMAESSTIDELLQWNDSFGGGGGRSGNGRHLSYYV* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4214 203 Gene3D - 99 111 - -
Mal5g4214 203 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 108 202 - -
Mal5g4214 203 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 3 109 - -
Mal5g4214 203 Gene3D - 112 188 - -
Mal5g4214 203 ProSitePatterns AAA-protein family signature. 70 89 IPR003960 GO:0005524|GO:0016887
Mal5g4214 203 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 108 202 - -
Mal5g4214 203 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 3 109 - -
Mal5g4214 203 CDD AAA 9 98 - -
Mal5g4214 203 Pfam ATPase family associated with various cellular activities (AAA) 3 97 IPR003959 GO:0005524|GO:0016887
Mal5g4214 203 Gene3D - 3 98 IPR027417 -
Mal5g4214 203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 133 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4214 Mal-Chr5 112974302 112975641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4214 3 128 Calmodulin-binding Proteins AT3G56690 39.098 1.29e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4214 - - pop:7478835 249.21