Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4188 ATGGGTCACAAAAAGCGAAACTCTGCTCCTCCTCCTCGTTCCAAACTCTCTCCGGCGGCTTCTCCGGTGTCTCAATCTCCCATCGGTGGAGCCGCCACCGCCACCGCCAACGGCTCTACTTCACCCGATGCCGATAATTCAATCATTCTGTTCGATCCTAACCCTAACAAGATCGAATTATCCAATAATGGTTCTCCTCAATCTGAGGCTTCTCATTTCTCTGCAATTAAGGTTGAATGTGAGCGTGCCCTAACCACGTTTCGTCGTGGGAATCATAATCGAGCTATGAAGCTCATGAAGGAGTTGTGTTTGAAGGAAGAGGGTACGTGTTATTCAGCTTTCGTTTATCGAATTCACGGGTTTATTTGTTTTAAAGTGGCTTCGGTTATCACTGATTGTAACGCGAAGCAACGGCATTTGAAGCATGCTGTTGATTTGGCTCGAAGAGCGGTTGAGCTTTCACCGAATTCGGTTGAGTATGCACATTTTCATGCTAGTGTGATGTTGGAAGCTGCTAATGAAGGGAAGGATTATGAGGATGTGGTGCATGAGTGTGAGAGAGGGCTTGCGATTGAAAATCCGACTGATCCTGCTAAGGAGACATTGCAGGATGAGAGTGAGCAGAAAGTGTCTAGTTTAGAAGATAGGATATTACATGTGCAGGGTGAGTTGAGGCAGCTGATTCAGAAGTCGAATATAGCTTCGTTGTCGTCTTGGATGAAGAATCTGAGTAATGGGGAAGAGAGGTTTCGGCTGATTCCATTAAGGAGGGCTGCGGAGGATCCTATGGAGGTTAGGTTGGTTCAGACTAGAAGGCCGAATGAGATTAAGAAGGTGACCAAGACGCCCGAGGAAAGAAGAAAAGAGATTGAGGTTAGGGTAGCTGCTGCGAGGCTGTTGCAGCAGAAGTCGGAGTCGCCTCAGTCTCCGAATGAAGGAGATAGGGAAGACAGAGCATTGGATTTGTCTTCGGGGTCTAGTCAGAGGATAGGTGAGAGGCGAAGGCATTTGAGGAAGAATGGCTCTACAGCTGAAAGGAGAAAGTGGGTGTTAAGTTATTGGGATTCAGTGGGTATGGATGCGAAGAAGGACTTGCTTAAGATTAAAATACGTGATATCGTGTCCCACTTCGTCTCTACAAAGGATACTTTGCTAAAAGATGTTTTATCAGAAGCTTTGTCTTATGGTGAAGCGAACAAAACATGGAGATTTTGGAGTTGCTGCATTTGTTCTGAGAGATTTTCCAATCAAGAATTTCATAGGCAGCATGTCATGCAGGTACACCTTCAGACTCTCCCGCCAAAAATGCAGAGAATTTTGCCTCAACATGTTGACAATGAGTGGATTGAGATGATTCTTAATTGTTCTTGGAAGCCTTTGGATGTCTCAGCTGCAGTTAAAATGCTTGACTATAAAGCAAAATTCAAAGGTTCATCACTTCCGGAGGACTATTTTACTCAGGACTACAATAATGATTGTTTTAAATATTCAAGCGGTTCTTATCATGATCAGGAAAGTTTAGGGTACAGTGTTGGTAATTGTACGACCGAAAGCAGGAAGTATTATAAAATTGCTGAAAGTGATGTCAGAGAAGGCATTGAAGACCAACAATTTATGGAAAATCTTGTTTCTGATTGTTGGCCAGTATCTGATGACGATGAGCGTGCAAACCTTCTGGAGAAAATCCATGGAGCATTTGAGATACTTATTAGACACAAATGTCTTGCTGCTAGTCATCTTCACAAGGTCATACAATTTAGTATGGGTGAGATCCAGGGTCTTGCTGCTGGTTCTGAACTTCTAAAGCATGATGTAGATCAAACGCCAATGTGTATATGCTTTCTGGGAGCTTTACAGCTTAAGAAAATTCTTCAATTTCTGCAGGAAATGTCTCATGCTTGTGGGTTGGGTGGATATCCTGATAAAAGTAGTAGTCCCAAGAATGATTTGCATGACATCAGTCACGGTACTGAAATCAAAGATAAAATTGTTCTCAGTGGAGATGCATCATGCCTCCTCCTGGACGAGTGTCTACTGACAACACAAGTCACTCCTGGTACAACGCAGGAGGCTGTCTTCGAGGACATGGTCACTCCAAGTTCTCCTGATGGAATTTCAGACAGTAGTGGTGCTTTGCTGTCCTGGATATATTCAAATCGGCCTATTGGGGATCAATTGGCGTCATGGATTCGGACCAAAGAAGATAAAATGTGCCAAGGACAAGAAATAGTCCGGACACTTGACAAGGAGTTTTATCAATTACATAGCTTGTGTCAGAAGAAGTGTGATCGTTTGAGTATTGAGGAAGCACTACAGACAATAGAGGATCTTTGTCTTGAAGAAGGTAAGAAGAGGGAAAATGCGAGTGAATTTGTGCAGCGAAGCTATGAGTCAGTCTTAAAAAGACGGAGAGATGACCTCGCGGAGAGAGAGAATGAAATGATGTATGCCGGCAATAGGGTTGAGTTTGATTGTATTACAAATGTTTTGCAAGAAGCAGAAGCGACGAGTCTTAATAATCAATATTGCTATGATGAAACTTATTCTGGCGTGACTTCTCAGTTATGTGACTTGGAATCCGGTGAAGATGATGAATGGAGAATGAAGGACTGCTTGCATCAAATGGACGGCTGTGTAGAAATTGCCATTCAGAAACTGAAAGAGCATTCATCTGTAGAGATTAGCAAAGTTGACGCGGAAATAATTAAATGTGTTTCAGAGGTGCAGCAATTGGAATTCAAGCTTGGGCATGTTTCTGCCTATGATTATCGAGCAATACTAGTGCCTTTGGTGCAGTTGTACCTAAAGATAGTTTTGGAAGATTTGGCTGAGAAAGATGCAAGGGAGAAATCTGATGCTGTAGGTGAAGCATTTTTGGCTGAACTTGCTCTTGATTCCAAGAGGATTGGCAAAGGGGGAAATGAGAACACGAGACATGTGGAGAAGACAAAGGATAAGAAGAAGAATAAAGATCACAGAAAAACAAGAGATTTGAAGGCCACAAGTGGTTCTATGCATCCATTACTTCAGTCTACAACTCTTGATTCTGATCTAGTATCACCTGATAGTGAGTTTCAAGATCATGAAGTTGTTTCTATGAATGATGATGATTTGGAACACCATGAAGAGGAATTTAGACGTAAAATTGAGCTTGAAGAGGAGGAAAAAAAGCTTGAAGAAACCTTGGAACTTCAACGGAGGATTGAAAATGAGGCCAAGCAGAAGCACCTCGCTGAGCAACAGAAGAAATTATCTGGTACATGTTCAGAGGAAGTGGTAGAAAAACTTCAAGATTGTCAATTGAAGCCTGTTGCTGATGGCTCAGATATGCAAGAACATATAAGACTACCTATGCAGGAACAGTTGGCAAAGGAGAATGGGTCCCCAAACAATCTGGAGGTTGTGCTTATTGCCACAACAAATGGTTCCATGATGCAGACTAAATCTTCAGCTGATTCAGCTTCCCAAAAATTTAATAATTTGCACCTGTCAAAAGTTAAACAAGATATGCCCAATGGAATTGTTCCAGAAAATGGCCTACCTTTGCCTGATCGGCGTGCAGGAAAAAAACATAAACGGAATAAGAATTCGTCTAAAATGGTTGATGGAAAGTTGGAACACAATGAGAATATTGAGGATACACACACAGTCAATCAAAATGCTAAACATTTGTTGGAAAACAATGGAGCAAAGGTGATGAAAGAATTGCAAGTGGAAGATGAGGAGGAGGAAAGATTCCAAGCTGATCTTAAAATGGCTGTACGCCAAAGCCTAGACACGTATCAAGCACGTGGAAGTTTGCCTTTGGTTTCGAGTTTGAGAATGCCACAGAGATCTTCCTCACAAGTAGACTGTTCAGGTCTGGCACCTGTGGAAGACTCAACTCAGGATGTGAATGGAGCTAGTTTGCCTGGTACGGGACTGAGGAATGAAGTTGGTGAATATAATTGTTTTCTCAATGTTATTATTCAGTCATTGTGGCATTTAAGACGCTTTCGGGTGGAATTTCTTGGCAGATCAAGATCAGAGCATGATCATGTCGGTAATCCCTGTGTTGTCTGTGCGTTGTATGAAATATTTACTGCTCTAGACCTTGCTTCAAAGGATTCAAGGAGAGAAGCAGTTGCACCTACTTCCCTTCGGATAGCTCTAAGCAATCTATATCCACACAGTAACTTCTTCCAAGAGGCTCAGATGAATGATGCTTCTGAGGTACTGGCAGTGATATTTGACTGCCTTCATAGATCATTTACCCGTCGTTCAAGTGTTTCTGATGCAAAATTAGTGGAAAGCAACTGCATGGGGTCTTGGGATTGTGCAGCCGGTAGTTGTATAGCACATTCACTTTTTGGAATGAACATTTTTGAACAAATGAACTGCTACCATTGTAATCTTGAGTCCAGACATTTGAAGTATACTTCCTTCTTTCACAATATAAATGCCAATGCCCTCAGGACAATGAAGGCTATGTTTCCCGAAAGCTCCCTTGACAAGCTTTTGAATCTTGTGGAGAGGAACCATCAGTTGACTTGTGATCTAGAAGTTGGTGGCTGTGGCAAGCTCAACCACATCCATCACTTTCTTCCATCTCCACCCCATGTTTTTATGACAGTTCTAGGTTGGCAAAATACATGCGAGAGTGTTGATGACATAACTGCAACTCTGGCAGCCCTGAGCACCAAGCTAGATATCAGTGTCCTTTATCGTGGTTTAGACCCTAAAAGCACCCATAACTTGGTTTCAGTGGTTTGCTACTATGGCCAGCATTATCATTGCTTTGCTTATAGCCATGACCACGGCCAATGGATTATGTATGATGACAAGACTGTTAAGATAATTGGTGGATGGGGCGATGTTCTTACTATGTGTGAGAGAGGGCATCTACAACCTCAAGTTCTCTTCTTTGAAGCTGTAAACTAG 4920 0.4238 MGHKKRNSAPPPRSKLSPAASPVSQSPIGGAATATANGSTSPDADNSIILFDPNPNKIELSNNGSPQSEASHFSAIKVECERALTTFRRGNHNRAMKLMKELCLKEEGTCYSAFVYRIHGFICFKVASVITDCNAKQRHLKHAVDLARRAVELSPNSVEYAHFHASVMLEAANEGKDYEDVVHECERGLAIENPTDPAKETLQDESEQKVSSLEDRILHVQGELRQLIQKSNIASLSSWMKNLSNGEERFRLIPLRRAAEDPMEVRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSESPQSPNEGDREDRALDLSSGSSQRIGERRRHLRKNGSTAERRKWVLSYWDSVGMDAKKDLLKIKIRDIVSHFVSTKDTLLKDVLSEALSYGEANKTWRFWSCCICSERFSNQEFHRQHVMQVHLQTLPPKMQRILPQHVDNEWIEMILNCSWKPLDVSAAVKMLDYKAKFKGSSLPEDYFTQDYNNDCFKYSSGSYHDQESLGYSVGNCTTESRKYYKIAESDVREGIEDQQFMENLVSDCWPVSDDDERANLLEKIHGAFEILIRHKCLAASHLHKVIQFSMGEIQGLAAGSELLKHDVDQTPMCICFLGALQLKKILQFLQEMSHACGLGGYPDKSSSPKNDLHDISHGTEIKDKIVLSGDASCLLLDECLLTTQVTPGTTQEAVFEDMVTPSSPDGISDSSGALLSWIYSNRPIGDQLASWIRTKEDKMCQGQEIVRTLDKEFYQLHSLCQKKCDRLSIEEALQTIEDLCLEEGKKRENASEFVQRSYESVLKRRRDDLAERENEMMYAGNRVEFDCITNVLQEAEATSLNNQYCYDETYSGVTSQLCDLESGEDDEWRMKDCLHQMDGCVEIAIQKLKEHSSVEISKVDAEIIKCVSEVQQLEFKLGHVSAYDYRAILVPLVQLYLKIVLEDLAEKDAREKSDAVGEAFLAELALDSKRIGKGGNENTRHVEKTKDKKKNKDHRKTRDLKATSGSMHPLLQSTTLDSDLVSPDSEFQDHEVVSMNDDDLEHHEEEFRRKIELEEEEKKLEETLELQRRIENEAKQKHLAEQQKKLSGTCSEEVVEKLQDCQLKPVADGSDMQEHIRLPMQEQLAKENGSPNNLEVVLIATTNGSMMQTKSSADSASQKFNNLHLSKVKQDMPNGIVPENGLPLPDRRAGKKHKRNKNSSKMVDGKLEHNENIEDTHTVNQNAKHLLENNGAKVMKELQVEDEEEERFQADLKMAVRQSLDTYQARGSLPLVSSLRMPQRSSSQVDCSGLAPVEDSTQDVNGASLPGTGLRNEVGEYNCFLNVIIQSLWHLRRFRVEFLGRSRSEHDHVGNPCVVCALYEIFTALDLASKDSRREAVAPTSLRIALSNLYPHSNFFQEAQMNDASEVLAVIFDCLHRSFTRRSSVSDAKLVESNCMGSWDCAAGSCIAHSLFGMNIFEQMNCYHCNLESRHLKYTSFFHNINANALRTMKAMFPESSLDKLLNLVERNHQLTCDLEVGGCGKLNHIHHFLPSPPHVFMTVLGWQNTCESVDDITATLAALSTKLDISVLYRGLDPKSTHNLVSVVCYYGQHYHCFAYSHDHGQWIMYDDKTVKIIGGWGDVLTMCERGHLQPQVLFFEAVN* 1640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4188 1639 Coils Coil 210 230 - -
Mal5g4188 1639 MobiDBLite consensus disorder prediction 1 48 - -
Mal5g4188 1639 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1639 - -
Mal5g4188 1639 MobiDBLite consensus disorder prediction 1169 1197 - -
Mal5g4188 1639 CDD Peptidase_C19 1397 1636 - -
Mal5g4188 1639 Pfam Protein of unknown function (DUF627) 82 193 IPR006866 -
Mal5g4188 1639 SUPERFAMILY Cysteine proteinases 1306 1636 IPR038765 -
Mal5g4188 1639 MobiDBLite consensus disorder prediction 970 1010 - -
Mal5g4188 1639 Coils Coil 1041 1081 - -
Mal5g4188 1639 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 1 1639 - -
Mal5g4188 1639 MobiDBLite consensus disorder prediction 18 47 - -
Mal5g4188 1639 Gene3D Cysteine proteinases 1292 1637 - -
Mal5g4188 1639 Pfam Protein of unknown function (DUF629) 351 880 IPR006865 -
Mal5g4188 1639 Pfam Ubiquitin carboxyl-terminal hydrolase 1307 1614 IPR001394 GO:0004843|GO:0016579
Mal5g4188 1639 MobiDBLite consensus disorder prediction 299 339 - -
Mal5g4188 1639 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1306 1638 IPR028889 -
Mal5g4188 1639 ProSitePatterns Zinc finger C2H2 type domain signature. 407 428 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4188 76 1636 C2H2 Transcription Factor Family AT3G47890 53.619 0.0 1591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4188 - - gmx:100799759 2314.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4188 5 112375404 112384981 Mal5g4188 5 112375404 112384981 ECH