Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4187 ATGACCCTTAAGGGTGGCACAACACAAGCCTGTGCAGCATGCAAATTCCAAAGAAGAAAGTGCACACCTGAGTGCCTTTTAGCTCCTTATTTCCCTGCAGACCAACCCAAAATATTCCAAAATGTGCACAAATTATTTGGAGTTAGCAACATTGTCAAAATACTAAAGTACCTGGAACCTAGTCAGAAGAAAACAGCCATGGACTCTATTATCATTCAAGCTAATTATAGGGATAAGTATCCTGTGCATGGATGTTGGGAAGAAATTTGCAGGCTACAATATCAAATATGGATGATGGAAGAAGAACTTCATGCTGTTTATCAACAGCTTGAAATTTGCAGGCAACAACAAAACCAACAACAGTTACCTCATGATGATGTAACTTCACAGTTAGAATTGGGAATGGCGACGCGTTCTTTCAACGCGCTCGCACTCTTTAATCAGTCTCCACAACCACAGACTTATAACAACAATAACACAGTGGCTGCACCTTTGTCTGTTTCTCAGCAACATTCCTACTCCAACAGCAACAGTGTGGATTATAATAACTCCCCTCTATACATGGATTCAAAGGATGATGCTACAAATCCTAATTTGTGGCTTCAGTGCCCTTACACAAATAATAATAGCAGTTCAATAGCAATGCAACCTCATAAGTTGGTTGCCTCAGAGTCACAGCCACTATCATCTGTCCAACAAGGAGTTGTTGAAGATAATTATGATGAGATGCATTCATTTTTTGATACAGTTGATGATAGGCAATCATACATTTATTCTAAGGAGGCTTATGAATCAAGTTCGGAAGAATCACTGAAAGATACAAGAAAGTGCACAGAGCATGTTTCTGAGAATGAACTGAAGAATGCTGCTGCTTGTTTCAGCCTTACCAGTGTCAACTGA 900 0.3967 MTLKGGTTQACAACKFQRRKCTPECLLAPYFPADQPKIFQNVHKLFGVSNIVKILKYLEPSQKKTAMDSIIIQANYRDKYPVHGCWEEICRLQYQIWMMEEELHAVYQQLEICRQQQNQQQLPHDDVTSQLELGMATRSFNALALFNQSPQPQTYNNNNTVAAPLSVSQQHSYSNSNSVDYNNSPLYMDSKDDATNPNLWLQCPYTNNNSSSIAMQPHKLVASESQPLSSVQQGVVEDNYDEMHSFFDTVDDRQSYIYSKEAYESSSEESLKDTRKCTEHVSENELKNAAACFSLTSVN* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4187 299 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Mal5g4187 299 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Mal5g4187 299 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 4 275 - -
Mal5g4187 299 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4187 Mal-Chr5 112370544 112371713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4187 1 262 AS2 family AT3G47870 38.889 4.03e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal5g4187 LOB 2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4187 - - lang:109357116 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4187 5 112370544 112371713 Mal5g4187 5 112370544 112371713 ECH