Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4172 ATGGCATCCTCCAATCTCACCAACCTCACAATTCCTCCTCCTTCTTCTCGTCTCCCCAACGATCCAAATCCATCTCCATCCACATCCACCACCAGCCCACAAGTCATACACAGTAGGTCCCACTCCTTCGTCGGTCCCTCCCCTCGCTTCCCTCCACCCTCCGATAACAACAACAACTCTCTCTTCTTCCTCGACGAACTCACTTCTAACAGCGACGACGATGAAATCCAAGAACCACTCCAACAACAAAAACTCCTCCCCAAATTCGGACCCTCAGATTTCCAAATTCTCAGAGTTGTAGGACAAGGTGCCTTTGGCAAAGTCTTCATGGTCAGAAAAAAAAAAGTTGCAGATGGAGATTCTTCAAACGGTAATGGAATCTTCGCTATGAAGGTTATGAGGAAAGACAACATCATTAAGAAAAATCATGTTGATTATATGAAAGCTGAAAGAGATATTCTCACTAAAGTTCTTCATCCTTTTATCGTTCCTCTTCGCTACTCTTTCCAAACTAAATCTAAATTATATTTGATTTTGGACTTTATAAATGGTGGACATCTTTTCTTTCATTTATGTCGACAAGGCATTTTTAGTGAGGATGAGGCAAGGATTTACACTGCTGAGATTGTATCTGCTGTTGCACATCTTCATAGCAAAGGCATCGTGCATCGTGATCTTAAACCTGAAAACATTCTCATGGACTCTGATGGCCATGTGATGCTAACTGATTTTGGAATGTCGAAAGAAATTGAGGAATCTGAGAGATCTAACTCTATGTGTGGGACTACAGAATATATGGCTCCGGAAATCCTTTTGGGTAAAGGACATAACAAGGACGCGGATTGGTGGAGTGTTGGTGCTCTCTTGTATGAAATGATAACGGGGAAGGCACCATTTACACATACTAACAGAAAGAAGCTACAAGAGAAAATTATTAAAGAGAAAGTTAAATTTCCACCATACCTTACAAGTGAAGCTCATTCTTTGCTCAAAGGATTGCTGCAAAAGGATCCATCGACAAGGTTAGGCAGTGGGCCAAATGGAGATGAGCAGATAAAAAATCATAAATGGTTTAAGTCAATCAATTGGACCAAATTGGAGGCAAGAGAACTGCAACCCAAGTTTAAACCAGCTGATGTGGCTGGAAAAGAGTGCACAGCTAATTTTGATCGATGTTGGACAACAATGCCTATTGAGGACTCACCAGCATCAACTCCTACAGCAGGTGACCATTTTCAGGGCTATACTTATGTGGCACCAAATCCTTGGCTTTCTTCTAGATAG 1284 0.4174 MASSNLTNLTIPPPSSRLPNDPNPSPSTSTTSPQVIHSRSHSFVGPSPRFPPPSDNNNNSLFFLDELTSNSDDDEIQEPLQQQKLLPKFGPSDFQILRVVGQGAFGKVFMVRKKKVADGDSSNGNGIFAMKVMRKDNIIKKNHVDYMKAERDILTKVLHPFIVPLRYSFQTKSKLYLILDFINGGHLFFHLCRQGIFSEDEARIYTAEIVSAVAHLHSKGIVHRDLKPENILMDSDGHVMLTDFGMSKEIEESERSNSMCGTTEYMAPEILLGKGHNKDADWWSVGALLYEMITGKAPFTHTNRKKLQEKIIKEKVKFPPYLTSEAHSLLKGLLQKDPSTRLGSGPNGDEQIKNHKWFKSINWTKLEARELQPKFKPADVAGKECTANFDRCWTTMPIEDSPASTPTAGDHFQGYTYVAPNPWLSSR* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4172 427 MobiDBLite consensus disorder prediction 1 62 - -
Mal5g4172 427 Gene3D Phosphorylase Kinase; domain 1 92 402 - -
Mal5g4172 427 ProSiteProfiles AGC-kinase C-terminal domain profile. 359 427 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mal5g4172 427 PANTHER RIBOSOMAL PROTEIN S6 KINASE 24 426 - -
Mal5g4172 427 ProSiteProfiles Protein kinase domain profile. 94 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4172 427 SMART pkinase_C_6 359 419 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mal5g4172 427 Pfam Protein kinase domain 94 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4172 427 ProSitePatterns Protein kinases ATP-binding region signature. 100 131 IPR017441 GO:0005524
Mal5g4172 427 Gene3D Transferase(Phosphotransferase) domain 1 182 377 - -
Mal5g4172 427 SMART serkin_6 94 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4172 427 Pfam Protein kinase C terminal domain 380 417 IPR017892 GO:0004674|GO:0005524|GO:0006468
Mal5g4172 427 SUPERFAMILY Protein kinase-like (PK-like) 80 381 IPR011009 -
Mal5g4172 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Mal5g4172 427 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 24 426 - -
Mal5g4172 427 MobiDBLite consensus disorder prediction 22 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4172 Mal-Chr5 112193134 112195801 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4172 8 420 AGC Kinase Gene Family AT3G08720 56.667 7.69e-178 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Mal5g4172 Pkinase 2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4172 K04688 - gmx:100798259 639.417