Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4171 ATGTCTTCTGCTTCAACCACCGCAGACTCCGCCGTCTCCGGCGAATTCATGCTCTTCGGAGTTAGAGTCGTCGTTGATTCCATGAGGAAGAGCGTCAGTATGAACAATCTATCACAATACGAACAACCTCAAGACAACAATATCACCATCAAGGACGATAATATCAACAAAGACGTTCTCGCCGCCGGTTATGCCTCCGCCGATGACGTCGTTCCTCAAAACTCCGCCAGAAACCGCGACCGCGAGCGTAAGCGAGGTATTCCATGGACGGAGGAAGAGCACAAGCTGTTTTTGGTTGGATTGCAGAAAGTAGGGAAAGGTGATTGGAGAGGAATCTCAAGGAACTACGTGAAAACACGAACACCTACGCAAGTTGCAAGCCATGCTCAGAAGTATTTTCTCCGCCGTAGTAATCTCAATCGCCGTCGCCGTAGATCCAGCCTCTTCGATATCACCACCGACACGGTATCTGCAATTCCAATGGAGGAAGAACAGGTCAAGAATCAAGACAGTGTTTCTCAATTACAGCCCATATGCCCTGCAGCCCCTGAAACTAGAAAAAACAATGGATTTCCTTTTATGTCAGTATATGAGTTGGGTGTTAATGAGAGTCCAATGGAAGAACTAACTCTTGGACATGGAAATGTGAAACACAATTTCCCAACCAGCAATCTATTCAATCCAATTCCTTTTGGTGTTTCAGATCCTAAAGCTTCCAATGTCTCTGATATGACCTCTAGTTCTAGTTCATCAATTGACCCTCCAACACTTTCCCTCGGGTTGTCCTTCTCGTCCGATCAAAGGAAGACACCATCAACACATTTACATTCAATGCCATGTTTCAATAATGGAGATAACATCATAAGCGTTGCTTAA 876 0.4532 MSSASTTADSAVSGEFMLFGVRVVVDSMRKSVSMNNLSQYEQPQDNNITIKDDNINKDVLAAGYASADDVVPQNSARNRDRERKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVSAIPMEEEQVKNQDSVSQLQPICPAAPETRKNNGFPFMSVYELGVNESPMEELTLGHGNVKHNFPTSNLFNPIPFGVSDPKASNVSDMTSSSSSSIDPPTLSLGLSFSSDQRKTPSTHLHSMPCFNNGDNIISVA* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4171 291 Gene3D - 87 139 - -
Mal5g4171 291 ProSiteProfiles SANT domain profile. 89 137 IPR017884 -
Mal5g4171 291 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 84 135 IPR006447 GO:0003677
Mal5g4171 291 CDD SANT 88 133 IPR001005 -
Mal5g4171 291 MobiDBLite consensus disorder prediction 239 277 - -
Mal5g4171 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 137 IPR017930 -
Mal5g4171 291 SMART sant 85 135 IPR001005 -
Mal5g4171 291 Pfam Myb-like DNA-binding domain 88 133 IPR001005 -
Mal5g4171 291 ProSiteProfiles Myb-like domain profile. 81 133 IPR001005 -
Mal5g4171 291 PANTHER KIN2 13 291 - -
Mal5g4171 291 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 13 291 - -
Mal5g4171 291 SUPERFAMILY Homeodomain-like 83 138 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4171 Mal-Chr5 112169165 112170698 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal5g4171 Myb_DNA-binding 1.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4171 - - gmx:778059 356.295