Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4152 ATGGCTGCCGCCGGCGAGATTTTCCGGTCAAATTTGACGGAGTTGATGGAGGAATCACCTTCAGGTGCAGGTGAATTGCATGTGCTTGCTGTTGATGATAGTCTTGTTGATCGTAAGGTGATTGAACGTTTGTTGAAGATTTCGTCATGCAAAGTTACGGTTGTTGAGAGTGCAAGAAGAGCTCTTCAATTTTTGGGATTGGATGGAGAGAACAGTGATATTGGATTTGATGGTGTGAAGGTTAATTTGATAATGACTGATTATTCCATGCCTGGGATGACAGGATATGAATTACTCAAGAAAATCAAGGAGTCTTCTGTTTTTAGAGAGATTCCAGTGGTGATCATGTCGTCGGAGAATGTTTTGACTCGAATTGATAGGTGCCTCGAGGAAGGAGCAGAGGATTTTCTGCTGAAGCCAGTGAAGTTGTCAGATGTTCCTGGAGGAAGGAGCAGAGGATTTTCTATTGAAACCAGTCAAGTTGAAGATGTAAGGCGCTTGAAAGATTTCATCATGAGAGGTGAAGTGAAGGATCGTGAGAAAAATTCTCTCAAAAGAAGGCGATCATCGGACAAGGGCATTTCATCCCTATCGACTACATTCTCACCAACGCGTCATTCATGTGATTCATCATCGTTAGTGTTCTCACCACTCTCACCATCCAGATTATCCTCTAAGAAGTATAGATTGTGA 693 0.4257 MAAAGEIFRSNLTELMEESPSGAGELHVLAVDDSLVDRKVIERLLKISSCKVTVVESARRALQFLGLDGENSDIGFDGVKVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSDVPGGRSRGFSIETSQVEDVRRLKDFIMRGEVKDREKNSLKRRRSSDKGISSLSTTFSPTRHSCDSSSLVFSPLSPSRLSSKKYRL* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4152 230 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 8 146 - -
Mal5g4152 230 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 146 IPR045279 GO:0009736
Mal5g4152 230 SMART REC_2 26 150 IPR001789 GO:0000160
Mal5g4152 230 MobiDBLite consensus disorder prediction 193 223 - -
Mal5g4152 230 SUPERFAMILY CheY-like 25 145 IPR011006 -
Mal5g4152 230 MobiDBLite consensus disorder prediction 181 230 - -
Mal5g4152 230 Pfam Response regulator receiver domain 28 145 IPR001789 GO:0000160
Mal5g4152 230 Gene3D - 26 199 - -
Mal5g4152 230 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 154 230 - -
Mal5g4152 230 PANTHER TWO-COMPONENT RESPONSE REGULATOR 154 230 IPR045279 GO:0009736
Mal5g4152 230 CDD REC_typeA_ARR 28 147 - -
Mal5g4152 230 ProSiteProfiles Response regulatory domain profile. 27 154 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4152 Mal-Chr5 111940321 111944408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4152 5 175 Response Regulator Gene Family AT3G48100 64.943 6.19e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal5g4152 Response_reg 4.6e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4152 K14492 - gmx:100796843 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4152 5 111940321 111944408 Mal2g2325 2 28915498 28917777 ECH
Mal5g4152 5 111940321 111944408 Mal5g4152 5 111940321 111944408 ECH