Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4129 ATGTATAGAAGCATTGAGTTTTCATTTTCACATAAAAAACTAACCAAAAAGATTAGTTTTCACATTATATCTATCTATCTATTAATAAAACACAGTTCGGTTCACAAGATCTTAGCTATTCTCTCTCGTGCCAATTTCGGTAGGCTAGATTCTTCAAAAAAAAAAAAAAACACAGTTCGGTTATTCACATTGTGTCGCATGGCAGCATCTCCATCTCCTCAATCTCCTCTTGCTGTGTTTCAAACTCCTCCTAATGATGGCAATATCAGTTATGAGAAAGTAACAACAACTTCTTCATCTATAAGCAGAATCAGTCCACTTATTTTGTTGGTTATAATAATACTAGCAATTATCTTCTTTCTCTATGGACTTATCCAATTGATTATATGGCTTGTGATAAAAAGACCACCCTCTTCATCTCATTATAATTCCAACAGGTTTCAAGAATCCACCCGAACTCGAGCTCTTCAGAGACAACTACAAAATCTATTCCATTTACATGATTCAGGTCTAGACCAAACTCTCATAGACACTCTTCCTATTTTCAAGTACCAAGATTTAATGGGTTTGAAGGAACCATTTGATTGTGCTGTGTGTCTTTGTGAGTTTTCTGAGCAGGAGAAGCTGAGGTTGGTTCCTATGTGTAGCCATGCTTTTCATATGAATTGTCTTGACACATGGCTTCTCTCAAATTCTACATGTCCTCTTTGTAGAGCAAATATCTCTAGCTCTAGTTTCCCTTTGGAGAATGTTGATGATTCTTTGGTTAGTCAAATTGTAGAGGAAGAAAAAGTTGGGAAAAGGTTGTTTTCTGTGAGACTTGGAAAATTCAGAAATAATGGATTGGAGGATGGTAGTAGTTGTAGTTTGGATGAGAGGAGATGTTATTCAATGGGTTCATATCAGTATCATGTTCTTAGTGATTTAAATTTGCAAGTGGTTTTGTCTCAATCTTGTTGTGATAATGATAACTTAGGAAGTGAAGAAAGTGGGAATGTGGAGGGGAAGATGATAGGGAACAGAACCAAAGCTCTCAGTCTCACCATGGTGACTCCTTCATCGGAAACAACACCCACCGTCCGCGTCACCAACATTCCACAAACCGCCACCGCCAAAGACCTCCTCCGTTACCTAGAAACCACCGTCGGCCCTTCCTCGGTCTTCGCCCTCGAAATCTTCAGCGACTACAACAACTGGAAATCTCGCGGCGTAGGCCGTATCCAGTTCGAGACCTTGGAAGCCAAGTCAAAAGCCCTAACACTCTCCAAGAATGATAAGCTTCTGTTCAACTCCCATTTCCTCTGTCTCTCCGATTCCGCCGATGACATCATTCCTAGGCCTGCTCTTCCCTGTAACCGCCTCAACAATGGCGTTCTCTATGCTGGTTTCCCCGTTGGATCAGACTGCATGAGCGTGCTGCAATCATGGGAAGGTGTTCGAGGTTGGGTTATGCCCGAAAGGAAGAGACTTGATTTCTGGGTCACTCATGGTGATCAGTGTTTTAAGCTTGAGATTCCGTTTGAAAATATTTTGGAGTGTGATGGGTATTGTTCTGATGATTCCAAACCCAATGCCCTTCTCTTGAAGCTGAGATATGGACCAAGGATATATCAGAAAAAGGAGGGGCCAAATGTAGCTGCCAAGTTTAAGGATGATAGGTATAGATTCTGTAAGGAGAATTTTGAGTTTGTGTGGGTGCGAACCACTGACTTCTCAACTTTAAAGTCAATTGGGCACTCTACCTCATTTTTCTGGGAAATTGTGGATGAATCGTTTGATTCTGATGTTTTTCGAAGTTTCCCACTCTACAGAGAGAATTTGAAGGATCTAAGTCTGGAAGATGGGGAAAAATTCTGTTCTCCAACTGAAACAGTTCCGCTTGTTAAATGTCGTTTGGAATCAAAGTTACCTTATGAGGCTCTTTTCCAATTGAATTCTCTTGTTCATACTCAGAAAATTAGTCTTGCTTCAGTGAATGATGAGTTGATTGACTTGTTGGCAAGCTTGGATGAAGAAACTAAGGCCGTGATTTTTCAAAAATTGCACAAGATGAGTTCCACTTGTTATGAGCCTCTAAAATATGTGAAGACTCAATTACATGTGCTTAGTATAAAGAAAAAAAGTGTTCTCCCATCACAACAGAAAAGGTTGGTGAATAATAACATAATGAGTTGTCATCGAGCCTTGATTACCCCGTCAAAGATTTATTGCCTTGGTCCCGAGCTTGAAACCTCAAATCATGTGGTAAAGCATTTTGCGGCATATGCTTCAGACTTCATGAGGATTACGTTTGTTGAAGAGGATTGGAGTAAACTTCCAAACAATGCAATCTCAACCAGTTTGAAAAAGGGAATCCTCACAAAGCCTTTCAGAACTGAAATATATAAGCGGATATTAACTATTCTTCGAGATGGGATTCTAATTGGATCGAAAAGATTTGAGTTTCTTGCCTTCTCTGCTAGTCAACTGCGGTCGAATTCGGTTTGGTTATTTGCTTCTAATGATAAAGTGAAAGCAGCAGACATCAGAGAATGGATGGGAAGCTTCAATAATATTCGCAGTGTTTCTAAATGTGCAGCAAGAATGGGTCAGTTATTCAGTTCTTCCAGGCAAACTTTTGAAATGGCCCCTCAAGATGTGGATTTAATTCCAGATATTGAAGTCACCTCTGATGGTATAAACTACTGTTTCTCAGATGGTATTGGAAAAATTTCACAGTCTTTTGCAAGGCAACTTGCAGAAAAGCTAAAATTAGATCAGAATCGTATTCCTTCAGCATTTCAAATTCGGTATGGTGGATATAAAGGTGTCATTGCTGTTGATCGCCATTCTTTTAAGAAGTTATCATTGCGTAAAAGTATGCTTAAGTTTGAATCCAAAAACAGAATGCTTTGCGTCACTAAATGGAGTGAATCAATGCCGTGCTTTCTCAATCGAGAGATTATATCCCTGCTCTCCACCTTAGGAATTAAAGATGAGGCGCTTTTGGCATTGCAAGAGGATCAATTGCAGTTGCTAGGAAAGATGTTGACTGATAGGGAGGCGGCTTTGGATGTTTTGGAAAGTTTAAATGGAGTTGATTCAAATAGCCTTTTAGTCAAGATGCTGCATAGTTTTTATGAGCCAAACAGTGAACCTTACCTAGCAATGATGCTCAAGGCTCATTATGTGTACCAGTTATCTGATTTGAAAAGCAGATGCCGAATATTTGTCCCCAAGGGCCGAGTCTTGATTGGCTGCTTGGATGAGACTGGTCTTTTGAATTATGGCCAAGTATTTGTCCGCATAACTGTGGCAAAAACTAAGGAAAAATTTGGTGATGAAAACTTAAGGAACGTGGATGGTGATGATAGCACACGTATTATAGTAGGTAAGGTGGTGGTGACAAAAAATCCTTGTCTTCACCCAGGAGATATCAGAGTCCTTGATGCTGTCTACAGTGAAGAATTAGAAGAAAAGGGCTTGAGGGATTGCCTTGTATTTCCACAAAAAGGACATAGGCCTCATCCAAATGAGTGCTCTGGAGGTGATCTTGATGGGGATTTATTTTTCATAAGCTGGGACAAAGATCTAATCCCATCTCAAACTGAAAATCCGATGGACTACACAGGAAGAAGGCCTCGTATAATGGAACATAAGGTGACACTGGAGGAAATACACCAATTTTTTGTTGATTACATGATCAATGATACTTTGGGTGCTATCTCCACCGCACATTTGGTTCACGCTGACCGTGAACCAGATAAGGCCAAGAGTAGAAAATGTCTGGAGTTGGCTGAGCTTCACTCCATGGCAGTTGATTTTGCTAAGACTGGAGCTCCTGCAGAAATGCCAAGAGCTTTGAAACCAAGAGAGTTTCCTGATTTCATGGAGAGGTCTGAAAAGCCTAGGTATACATCCGAAGGGGTATTAGGAAAACTCTACCACGCCTTAGTCGACTCAACGTTGCTAGTAAGGTCTGACATGGTCTTGTCTGAGAAGTTTGCCGAAGAAGCATATGATCATCATCTTGAAGTTAATGGGTTTGAGGTCTTTCTTGAGACTGCCTCAAGTCACAGGGAAATGTATGCACAGAAGATGAGCTCTTTGATGAGCTTCTATGGTGCACAGACTGAGGATGAAATGCTGACTGGTAACTTGCAAAACCGTGCTTCTTATTTGCAGCGCGATAACAGGAGATATGGAGATATGAAGGATCGAATTCTAATCTCAGTAAAGGATCTTCAGCTGGAAGCTAAAGAATGGTTTGAAAGTGACTGCCAACCGCATGAATATCAACTTATGGCATCTGCATGGTATCATGTGACCTATCACCCCAAATATTACAACAAAAGCTCCACCTTTTTAAGCTTTCCATGGATCGTCGGTGACATTTTGTTGCACATCAAGTCAAAAGGATAA 4401 0.4047 MYRSIEFSFSHKKLTKKISFHIISIYLLIKHSSVHKILAILSRANFGRLDSSKKKKNTVRLFTLCRMAASPSPQSPLAVFQTPPNDGNISYEKVTTTSSSISRISPLILLVIIILAIIFFLYGLIQLIIWLVIKRPPSSSHYNSNRFQESTRTRALQRQLQNLFHLHDSGLDQTLIDTLPIFKYQDLMGLKEPFDCAVCLCEFSEQEKLRLVPMCSHAFHMNCLDTWLLSNSTCPLCRANISSSSFPLENVDDSLVSQIVEEEKVGKRLFSVRLGKFRNNGLEDGSSCSLDERRCYSMGSYQYHVLSDLNLQVVLSQSCCDNDNLGSEESGNVEGKMIGNRTKALSLTMVTPSSETTPTVRVTNIPQTATAKDLLRYLETTVGPSSVFALEIFSDYNNWKSRGVGRIQFETLEAKSKALTLSKNDKLLFNSHFLCLSDSADDIIPRPALPCNRLNNGVLYAGFPVGSDCMSVLQSWEGVRGWVMPERKRLDFWVTHGDQCFKLEIPFENILECDGYCSDDSKPNALLLKLRYGPRIYQKKEGPNVAAKFKDDRYRFCKENFEFVWVRTTDFSTLKSIGHSTSFFWEIVDESFDSDVFRSFPLYRENLKDLSLEDGEKFCSPTETVPLVKCRLESKLPYEALFQLNSLVHTQKISLASVNDELIDLLASLDEETKAVIFQKLHKMSSTCYEPLKYVKTQLHVLSIKKKSVLPSQQKRLVNNNIMSCHRALITPSKIYCLGPELETSNHVVKHFAAYASDFMRITFVEEDWSKLPNNAISTSLKKGILTKPFRTEIYKRILTILRDGILIGSKRFEFLAFSASQLRSNSVWLFASNDKVKAADIREWMGSFNNIRSVSKCAARMGQLFSSSRQTFEMAPQDVDLIPDIEVTSDGINYCFSDGIGKISQSFARQLAEKLKLDQNRIPSAFQIRYGGYKGVIAVDRHSFKKLSLRKSMLKFESKNRMLCVTKWSESMPCFLNREIISLLSTLGIKDEALLALQEDQLQLLGKMLTDREAALDVLESLNGVDSNSLLVKMLHSFYEPNSEPYLAMMLKAHYVYQLSDLKSRCRIFVPKGRVLIGCLDETGLLNYGQVFVRITVAKTKEKFGDENLRNVDGDDSTRIIVGKVVVTKNPCLHPGDIRVLDAVYSEELEEKGLRDCLVFPQKGHRPHPNECSGGDLDGDLFFISWDKDLIPSQTENPMDYTGRRPRIMEHKVTLEEIHQFFVDYMINDTLGAISTAHLVHADREPDKAKSRKCLELAELHSMAVDFAKTGAPAEMPRALKPREFPDFMERSEKPRYTSEGVLGKLYHALVDSTLLVRSDMVLSEKFAEEAYDHHLEVNGFEVFLETASSHREMYAQKMSSLMSFYGAQTEDEMLTGNLQNRASYLQRDNRRYGDMKDRILISVKDLQLEAKEWFESDCQPHEYQLMASAWYHVTYHPKYYNKSSTFLSFPWIVGDILLHIKSKG* 1467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4129 1466 Pfam RNA dependent RNA polymerase 730 1310 IPR007855 GO:0003968
Mal5g4129 1466 Gene3D - 348 440 IPR012677 -
Mal5g4129 1466 SUPERFAMILY RNA-binding domain, RBD 351 432 IPR035979 GO:0003676
Mal5g4129 1466 SUPERFAMILY RING/U-box 175 243 - -
Mal5g4129 1466 CDD RRM_SF 360 427 - -
Mal5g4129 1466 SMART ring_2 196 237 IPR001841 -
Mal5g4129 1466 PANTHER RNA-DEPENDENT RNA POLYMERASE 2 353 1465 - -
Mal5g4129 1466 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 171 245 IPR013083 -
Mal5g4129 1466 CDD RING-H2_PA-TM-RING 195 238 - -
Mal5g4129 1466 PANTHER RNA-DEPENDENT RNA POLYMERASE 353 1465 IPR007855 GO:0003968
Mal5g4129 1466 Pfam Ring finger domain 195 238 IPR001841 -
Mal5g4129 1466 ProSiteProfiles Zinc finger RING-type profile. 196 238 IPR001841 -
Mal5g4129 1466 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 358 441 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4129 Mal-Chr5 111669829 111677608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4129 155 316 C3H Transcription Factor Family AT2G18650 40.909 1.60e-41 157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4129 5 111669829 111677608 Mal5g4129 5 111669829 111677608 ECH