Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4124 ATGGCAGCTCGCACACTTTCCCGTTTGCTTTCTCGCTCTCGCTCTCTATCTTCTTCCTCTGGAGCTGCTGCTTCTCTGCTTCGCTCACCACTAGGAAGAAAATCTGAAGGGTGGATTAACACAAACAGATTTAGCACCGCTGCAGCTGTGGAGGAATTGATTACTCCACAAGTTTCAATCAATTATACACAGCATCTTATAAATGGAAAATTTGTGGATGCTGCATCAGGGAAAACATTTCCAACACTTGACCCACGCACAGGAGAAGTGATTGCTCAGGTTGCTGAAGGTGATGCTGAAGATATTAACCGTGCAGTATCAGCTGCTCGTGAGGCCTTTGATAATGGACCTTGGCCTAAAATGAGTGCTTATGAAAGATGTCGTATATTGCTGCGATTTGCTGATTTGGTTGAGAAGCACAGTAATGAGATTGCAGCTCTGGAGGCATGGAACAACGGAAAGCTTTATGAACAGGCTGCCAAATCTGAATTACCTATGTTTGTGCGTTTATTTCGCTACTATGCTGGTTGGGCAGATAAAATTCATGGGATGACTGTCCCAGCTGATGGAGATTATCATGTCCAGACATTGCATGAACCAATTGGTGTAGCGGGACAAATTATACCTTGGAACTTTCCTCTACTTATGTTTGCTTGGAAAGTTGGACCAGCTCTAGCATGTGGTAATACCATTGTCCTCAAGACTGCTGAGCAAACACCGCTAACGGCTCTAGTTGTGGCAAAACTGCTTCATGAGGCTGGCCTACCCCCAGGTGTTCTGAATATAGTTTCTGGCTATGGTCCAACTGCTGGTGCACCTCTTGCAAGTCATATGGATGTAGACAAGTTAGCGTTCACCGGATCGACAGATACTGGAAAAGTTGTACTTGAACTGGCTGCAAGAAGCAATCTTAAGCCAGTGACATTAGAACTTGGAGGGAAATCACCTTTCATTGTTTGTGAGGATGCTGATATTGACAAGGCTGTTGAAATTGCTCACTTTGCTCTTTTCTTTAATCAGGGACAATGTTGCTGTGCTGGATCCCGTACCTTCGTACATGAGCGTATCTATGATGAGTTCTTGGAGAAATCAAAGGAACGAGCTTTGAGACGTGTTGTTGGTGATCCATTTAAGAAGGGTGTAGAGCAAGGTCCTCAGATTGATTCGAAACAATTTGAGAAAGTACTTAGGTACATAAAATCTGGAATTGATAGCAATGCTACACTTGAATGTGGAGGTGGGAGATTGGGTTCAAAAGGCTTCTTTGTCCAGCCAACTGTATTCTCAAATGTTCAGGATGATATGTTGATAGCAAAAGATGAAATCTTTGGCCCAGTTCAGTCCATCTTGAAGTTCAAGGACACTGATGAAGTAATTCGACGAGCGAATGCAACACGTTATGGTTTAGCGGCAGGTGTTTTCACAAAAAATGTGAGCACAGCCAACACTATGATGCGAGCACTAAGAGCTGGAACAGTGTGGATTAATTGCTTTGATGTGTTTGATGCTGCAATTCCTTTTGGTGGTTACAAGATGAGTGGGATTGGTAGGGAGAAAGGAATATACAGTCTTCACAACTATCTGCAGGTAAAAGCTGTGGTGTCTCCACTGAACAATCCTGCGTGGCTGTAA 1632 0.4369 MAARTLSRLLSRSRSLSSSSGAAASLLRSPLGRKSEGWINTNRFSTAAAVEELITPQVSINYTQHLINGKFVDAASGKTFPTLDPRTGEVIAQVAEGDAEDINRAVSAAREAFDNGPWPKMSAYERCRILLRFADLVEKHSNEIAALEAWNNGKLYEQAAKSELPMFVRLFRYYAGWADKIHGMTVPADGDYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTALVVAKLLHEAGLPPGVLNIVSGYGPTAGAPLASHMDVDKLAFTGSTDTGKVVLELAARSNLKPVTLELGGKSPFIVCEDADIDKAVEIAHFALFFNQGQCCCAGSRTFVHERIYDEFLEKSKERALRRVVGDPFKKGVEQGPQIDSKQFEKVLRYIKSGIDSNATLECGGGRLGSKGFFVQPTVFSNVQDDMLIAKDEIFGPVQSILKFKDTDEVIRRANATRYGLAAGVFTKNVSTANTMMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVSPLNNPAWL* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4124 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 315 504 IPR016163 GO:0016620
Mal5g4124 543 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 32 543 - -
Mal5g4124 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 77 533 IPR016162 GO:0016491
Mal5g4124 543 SUPERFAMILY ALDH-like 57 537 IPR016161 GO:0016491
Mal5g4124 543 CDD ALDH_F2BC 60 534 - -
Mal5g4124 543 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 32 543 - -
Mal5g4124 543 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 309 316 IPR029510 GO:0016491
Mal5g4124 543 Pfam Aldehyde dehydrogenase family 71 533 IPR015590 GO:0016491
Mal5g4124 543 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 337 348 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4124 Mal-Chr5 111625783 111629318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4124 1 543 Aldehyde Dehydrogenase Gene Family AT3G48000 78.860 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4124 K00128 - gmx:100811501 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4124 5 111625783 111629318 Mal2g2362 2 29463376 29466780 ECH
Mal7g5237 7 121578566 121589238 Mal5g4124 5 111625783 111629318 ECH
Mal5g4124 5 111625783 111629318 Mal5g4124 5 111625783 111629318 ECH