Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4096 ATGAAAATTTTCCACATTTTATGTGGAATCATAATATCCTCATTGTTGTCATGTGTGACATGCTTAGACGGTACGGTACAAGAAGCGGGTCTAACATGCGGGTCTTATCAATACCCTAACGATGGTAACAACAATAAGTTGATGCAAAACTTGATGGTTGTAATGGACGCGGTCTCATTTCAGGTGAAAGAACACGGTTGGGGAGCACAAACGTTAGTTGGAAATTGGCATCCAATGTACGCATTAGGACAATGTCAACGCGATCTCAATTCGACACAATGCAACACTTGTTTCAACCAAGCGAGGCAATTGTTATCGAGGTGTGTACCAAAGGTTTCAGGTAGAATTTACCTTGATGGTTGTTTTCTTCGTTATGATAACTACACTTTCTTTGAGGAGAGTGTGGACTACACGCGTGATACGAATATGTGTGGGTCGGAAAAGGGAAAGAATGTGGTCGCGGAACGTGTTGCGTCTGTGATTTTGAATGTGAGTAAGGGTGCTGGGGAACATAAATTTTCTGTGGATGGGGAAGGTGGTGTGTTTGCAATGGCACAGTGTTGGGAGACGGTGAATAAATGGAATTGTCAAAAATGTTTGAGAGAAGCAGGGAAAAAAGTGCAGGAATGTGTTCCTAGTAATGAGGGTACAAGCTTGTTTACCGGTTGTTTTTTGAGGTATTCAACAAGGAAATTCTATAATGATGTCTTAGTGCAAAATGATACATGGAGTGATACTCCTCCTCCCCCAGGAGATAACAATTTTGGTATGTCACCTAATTTTGCCTACGTAGCTGGTTTCAGTTTTAAGTATGATGTGCTTGAGAAGGGCACGAATTATTTCGATCCCGCAAATAAAGTAGGCCTTCATGGAGAAGGAGATGGTTCTGTGTTCAAAGGAACACTTCCCTCAGGAAGAACTGTTGCTGTTAAACGTTTGTTTTTTGATACAAGACAATGGACAGATGTGTTATTCAATGAAGTCAATTTGATTAATGGGATTCAACATAAGAATGTGGTCAAACTTTTAGGGTGTAGTGTTGATGGCCCTGAAAGCTTGTTGGTTTATGAATTTCTTCCTAATAAAAGTCTTGATCAAATCCTTTTCGGTAAGGACTCAAAAAGTGTTATGACCTGGGAGCAACGGTTTCAAATCATATGTGGGATAGCTGAGGGCTTAGCATATCTTCATGAAGGATCAGGAACAAAAATTGTTCATAGAGACATAAAGTCCAGTAACATTCTACTTGATGAGTCTTTAAATCCAAAGATTGTTGATTTTGGTCTTGCTCTTTGTGTTGCTGAAAATAAATCTCATCTTAACAATGGAACTGCAGGGACTAAGGGATATATGGCTCCAGAGTGTCTCAGCAAAGGACAACTAACAGAGAAGACAGATATATATGCTTTTGGTATTATGGTTACTGAAATTGTTTGTGGTAAAAAGAACGGTGTTTTTCCACAAGGTTCAAATTTAGTGTGGAAGAATTACAAGGCGAACAATATCACAACATCAATTGATCCTGCTTTGCATGGAAAATTTGAGGTAGAAGAGGCATCAAATTCTCTCCAAACTGCACTTCTTTGTACACAATCTTCTCCTACTCTTAGACCATCCATGTCAGAAGTAGTTCAAATGCTAACAAAAAAAGACTACACAATTCCCACTCCAAAGCAACAACCATTCCTCAACAACCATTTGACAATGAGCATTTTGTCAAATGATCATGCAAGTACAAGATCATCTTTCCATAGCACCACTAGTTCCTTACCCCCAGGTGAAGATACAACACTGCTAGATCATCCATTTTCTTCTTCTGCTAAGTTCAACACTTCAGAGAGAGGTGAATCAGATATCCAAGCAAACATTGTGTTACCTCAGCCAAGGTAG 1890 0.3952 MKIFHILCGIIISSLLSCVTCLDGTVQEAGLTCGSYQYPNDGNNNKLMQNLMVVMDAVSFQVKEHGWGAQTLVGNWHPMYALGQCQRDLNSTQCNTCFNQARQLLSRCVPKVSGRIYLDGCFLRYDNYTFFEESVDYTRDTNMCGSEKGKNVVAERVASVILNVSKGAGEHKFSVDGEGGVFAMAQCWETVNKWNCQKCLREAGKKVQECVPSNEGTSLFTGCFLRYSTRKFYNDVLVQNDTWSDTPPPPGDNNFGMSPNFAYVAGFSFKYDVLEKGTNYFDPANKVGLHGEGDGSVFKGTLPSGRTVAVKRLFFDTRQWTDVLFNEVNLINGIQHKNVVKLLGCSVDGPESLLVYEFLPNKSLDQILFGKDSKSVMTWEQRFQIICGIAEGLAYLHEGSGTKIVHRDIKSSNILLDESLNPKIVDFGLALCVAENKSHLNNGTAGTKGYMAPECLSKGQLTEKTDIYAFGIMVTEIVCGKKNGVFPQGSNLVWKNYKANNITTSIDPALHGKFEVEEASNSLQTALLCTQSSPTLRPSMSEVVQMLTKKDYTIPTPKQQPFLNNHLTMSILSNDHASTRSSFHSTTSSLPPGEDTTLLDHPFSSSAKFNTSERGESDIQANIVLPQPR* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4096 629 Pfam Salt stress response/antifungal 43 128 IPR002902 -
Mal5g4096 629 Pfam Salt stress response/antifungal 172 229 IPR002902 -
Mal5g4096 629 Gene3D Transferase(Phosphotransferase) domain 1 359 560 - -
Mal5g4096 629 Pfam Protein kinase domain 291 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4096 629 ProSiteProfiles Gnk2-homologous domain profile. 29 130 IPR002902 -
Mal5g4096 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Mal5g4096 629 SMART serkin_6 284 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4096 629 ProSiteProfiles Protein kinase domain profile. 281 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g4096 629 MobiDBLite consensus disorder prediction 578 616 - -
Mal5g4096 629 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1 246 - -
Mal5g4096 629 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 254 628 - -
Mal5g4096 629 SUPERFAMILY Protein kinase-like (PK-like) 270 579 IPR011009 -
Mal5g4096 629 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Mal5g4096 629 ProSiteProfiles Gnk2-homologous domain profile. 131 232 IPR002902 -
Mal5g4096 629 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 246 - -
Mal5g4096 629 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 254 628 - -
Mal5g4096 629 Gene3D - 137 232 IPR038408 -
Mal5g4096 629 Gene3D - 32 130 IPR038408 -
Mal5g4096 629 Gene3D Phosphorylase Kinase; domain 1 262 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4096 Mal-Chr5 111343991 111347220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4096 23 447 Receptor kinase-like Gene Family AT5G40380 43.261 2.01e-118 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g4096 Pkinase 5.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4096 - - gmx:100780384 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4096 5 111343991 111347220 Mal5g4096 5 111343991 111347220 ECH