Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4065 ATGGAATCCAACCCCAAAAATACTATCAAGTTCCTCTTTAGCTACGGTGGTAAAATCCTTCCCCGCCCGACCGACGGCAAGCTCCGCTACTCCGGCGGCCACACCAGAGTCCTCGCTCTCTCTCCTACCATTTCTTTCTCAGAGCTAATAGTGAAGCTTGTGGAATTGTGCGGTTCATCAGTCACATTAAAGTGTCCATTACCAAACGGAGATTTAGAGACATTAATTTCAATCACCAGCAACGAAGATCTGAAAAACATAATTGAAGAATACAATCGAGCTTCTTCATCATTAACTCATCCATTGAAGATCAGAGCCATTCTTTCGCCGCCAAAGAAATTATCTCCTCCTCCGTCTTCTTCGTCCAGTTCAACTCACTCTCCGTCCGGTTCGGTTTATGCCTCCGTGGAATCACCGCCGTATCCGGCGGCGAATCGGCTTAATCACCTGAATTGCTCGCCAGTTTCGCTTGGGTATCCGATAGGTATTCATAGTGGGGCTGTGAAAGGTGGCTGTTACACAGGGAAATTAGATGGAAGCCCTAGATTCCTTTACCGGTTCGCTAATAATTATTGTCATTGA 582 0.4639 MESNPKNTIKFLFSYGGKILPRPTDGKLRYSGGHTRVLALSPTISFSELIVKLVELCGSSVTLKCPLPNGDLETLISITSNEDLKNIIEEYNRASSSLTHPLKIRAILSPPKKLSPPPSSSSSSTHSPSGSVYASVESPPYPAANRLNHLNCSPVSLGYPIGIHSGAVKGGCYTGKLDGSPRFLYRFANNYCH* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4065 193 Gene3D - 27 108 - -
Mal5g4065 193 Pfam PB1 domain 24 96 IPR000270 GO:0005515
Mal5g4065 193 PANTHER PB1 DOMAIN PROTEIN 1 193 - -
Mal5g4065 193 MobiDBLite consensus disorder prediction 118 134 - -
Mal5g4065 193 PANTHER OS05G0427100 PROTEIN-RELATED 1 193 - -
Mal5g4065 193 CDD PB1_UP2 14 108 - -
Mal5g4065 193 MobiDBLite consensus disorder prediction 110 135 - -
Mal5g4065 193 SUPERFAMILY CAD & PB1 domains 25 113 - -
Mal5g4065 193 SMART PB1_new 23 111 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4065 Mal-Chr5 110894045 110895164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4065 7 90 MAP Kinase Kinase Kinase AT2G35050 52.381 6.60e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4065 - - mtr:MTR_4g105020 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4065 5 110894045 110895164 Mal5g4065 5 110894045 110895164 ECH
Mal5g4065 5 110894045 110895164 Mal2g2422 2 30395949 30396648 PCT