Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4029 ATGGAAATGAATACCCAAACCACATCAATGGATTTCCTTGACACTCGTGTCTTACCTGAATATGATGTATTTATTCACACTTCTGATGGCACACGCATTCCAGCTCACACAAGCATTCTGGCCTCGGTGTCTCCTGTTTTTGAGAACATTATTGATCAACCGCGTAAGCAACGGAGCTCCGAAAGAATCATCAAAATCCATGGCGTTCCTTCCACCGCCGTAATCGCCTTTGTCGGATTCCTTTATTCATCCAGGTGTACGGAGGATGAGATGGACAAATACGGAATACACCTGCTGGCACTATCTCACGTGTACAATGTGCCGCAACTGAAACAGAGATGCATCAAAGGTCTTGTTCAACGGTTGACATCAGAAAACGTGGTGGATGTACTCCAACTCGCCAGGCTCTGCGATGCACCGGATCTCCGTCTCCGTTGTATGAAGCTTCTCACCAATCACTTCAACGCGGTTCAGAAAACTGAGGGATGGAGGTTTCTCACCAAACACGATCCCGTGCTTGAACTCGATATCCTTCGCTTCATGGATGAAAGCGAAACGAGGAGAGAGAAATCGAGGAAGCATAGAGAGGAGCAGGGGCTTTACGCGGAACTTTCAGAGGCGATGGAGTGTTTGGAGCATATATGTACGGAAGGTTGCACCGACGTTGGACCCTACCATGTAGAGGTTGACAGAGAGAGGAAGCCATGTAACAGATTCTCTACGTGTCAAGGGCTTCAGCTTCTGATTCGTCATTTTGCAACGTGCAAGAGGAGGGTGAAGGGAGGGTGCTGGAGGTGCAAACGTATGTGGCAGCTGTTTAGATTGCATTCATATGTTTGTCAACAGACGGATGATTCGTGCAATGTTCCTCTTTGCAGGCAATTTCAATTGAGAATGGAGCAAGAGAAAAGGAAAGATGATCCCAAGTGGAAACTACTAGCAAGGAAGGTGGCCTCAGCTAAAGTTATGTTTTCATTGTCTCTGCCTAAGAGAAAGAGAGATGAAGAAATGAGAGTGACCATAGACAACCGTGGAATAAGATGTTTTGGTTACAATGAATATTGTAACAATAATGTATCGGACGATCGATGTGTTTCATGTTGA 1104 0.4583 MEMNTQTTSMDFLDTRVLPEYDVFIHTSDGTRIPAHTSILASVSPVFENIIDQPRKQRSSERIIKIHGVPSTAVIAFVGFLYSSRCTEDEMDKYGIHLLALSHVYNVPQLKQRCIKGLVQRLTSENVVDVLQLARLCDAPDLRLRCMKLLTNHFNAVQKTEGWRFLTKHDPVLELDILRFMDESETRREKSRKHREEQGLYAELSEAMECLEHICTEGCTDVGPYHVEVDRERKPCNRFSTCQGLQLLIRHFATCKRRVKGGCWRCKRMWQLFRLHSYVCQQTDDSCNVPLCRQFQLRMEQEKRKDDPKWKLLARKVASAKVMFSLSLPKRKRDEEMRVTIDNRGIRCFGYNEYCNNNVSDDRCVSC* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4029 367 Gene3D - 123 193 - -
Mal5g4029 367 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 3 350 IPR044513 -
Mal5g4029 367 SUPERFAMILY POZ domain 21 121 IPR011333 -
Mal5g4029 367 Gene3D TAZ domain 194 321 IPR035898 -
Mal5g4029 367 SUPERFAMILY TAZ domain 196 296 IPR035898 -
Mal5g4029 367 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 3 350 - -
Mal5g4029 367 CDD BACK 123 175 - -
Mal5g4029 367 ProSiteProfiles BTB domain profile. 21 90 IPR000210 GO:0005515
Mal5g4029 367 Pfam TAZ zinc finger 205 292 IPR000197 -
Mal5g4029 367 SMART BTB_4 21 122 IPR000210 GO:0005515
Mal5g4029 367 SMART TAZ_2 198 293 IPR000197 -
Mal5g4029 367 Gene3D Potassium Channel Kv1.1; Chain A 2 122 IPR011333 -
Mal5g4029 367 Pfam BTB/POZ domain 22 120 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4029 Mal-Chr5 110103878 110106964 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Mal5g4029 BTB 1.8e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4029 - - cam:101496955 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4029 5 110103878 110106964 Mal5g4029 5 110103878 110106964 ECH
Mal5g4029 5 110103878 110106964 Mal2g2469 2 31171830 31174309 PCT