Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4024 ATGGCCTCGAACGAGGGATTTTTGACTGAAGGACAGAGGGAGATGTTGAAAATTGCGAGTCAGAATGCTGAGAATTTGTCTTCGTCGCCTAAGTCGCCATCGTCATTGCTTGCTGATCATCATCACATCAAAGCTCCTGCTGGTGGTAAGGCTCAAACCGCTGGGATAGCGGTGAGGCATGTGCGAAAGTCGCACTCTGGAAAGTATGGGCGGGCTAAGAAGGATGGTGCTGGTGGTAAGGGCACTTGGGGAAAGTTGATGGACACAGAAGTTGATTCTCACTTGGACCGCAATGATCCAAATTATGACAGTGGCGAGGAACCCTATCAGCTGGTTGGAACTACTGTCACTGATCCCTTGGATGAATTCAAGAAAGCAGTGGTATCCCTCATAGAAGAATACTTCAGTAATGGGGATGTAGATTTGGCAGCATCTGACCTCAGAGAACTTGGCTCAAGTGAATATTATCCATACTTCATTAAGCGACTTGTTTCCATGGCAATGGACAGGCATGATAAGGAGAAAGAAATGGCTTCTGTCCTGCTTTCAGCACTGTATGCTGATGTCATTAGTCCCACACAGATTAGGGATGGATTCTTTATGCTTATTGAATCTGCTGATGATCTTGCAGTGGATATCCTAGATGCAGTTGACATCCTTGCTTTATTCCTGGCACGTGCTGTTGTTGATGACATTCTTCCTCCAGCCTTTCTTGCCAGGGCAAGGAAGGCTCTTCCAGAATCTTCCAAGGGAGCTCAGGTAGTCAAGACTGCCGAGAAGAGTTATCTCTCTGCTCCACACCATGCAGAACTTGTGGAAAGAAGATGGGGTGGTAGCACTCACATTACTGTTGAAGAAATGAAGAAAAAGATTGCTGATATACTTAAAGAATATGTTGATAGTGGCGAGACACTTGAAGCCTGTAGGTGTATACGTGAGTTGGGTGTTGCGTTCTTCCATCACGAGGTTGTGAAGAAGGCCCTGGTACTTGCCATGGAGATTCCTTCAGCAGAACCTCTACTGTTGAAGCTGTTAAAAGAAGCAGCAGAAGAAGGACTGATTAGTTCCAGCCAAATGGTGAAAGGGTTTTCTCGATTGGAAGAAGGCCTAGATGATCTTGCCCTTGATATTCCATCAGCTAAAGTTTTGTTTCAGTCATTTATCCCCAAGGCAATCTCTGAAGGATGGCTTGATGTTTCCTTTGCCAATCCAGCTGGTGAAGATGGGGAATTCCAAGTTGAAGATGAGAAGGTGAGGAAGTACAAAAAGGAAGCTGTAACTATAATTCACGAGTATTTTCTCTCTGATGACATTCCTGAACTCATTCGAAGTCTAGAAGATCTTGGAGCACCTGAGTATAACTCTATATTTTTGAAGAGGTTAATAACACTTGCTTTGGACCGAAAGAACAGAGAAAAGGAAATGGCATCTGTCCTGCTATCTGCACTTCATATAGAGATATTCTCAACAGAGGATATTGTTAATGGTTTTGTCATGCTTCTGGAAAATGCAGAAGATACAACACTGGATATATTGGATGCTTCAAGTGAGCTTGCTCTGTTTTTAGCTCGGGCTGTGATTGATGATGTACTTGCCCCATTGAACTTGGACGAAATTGGCAGCAGGCTACCACCAATGTGCAGTGGTAGGGAAACTGTACGTATGGCTCGGACACTCTCTTCTGCTCGTCATGCAGGTGAAAGGCTTTTGAGATGCTGGGGCGGGGGAACTGGATGGGCTGTGGAGGATGCTAAGGACAAGATCACAAAGCTCTTGGAGGAGTACGAAAGTGGTGGGGTTGTCAGTGAAGCATGCCAGTGTATTCGTGACTTGGGGATGCCTTTCTTCAACCATGAGGTGGTCAAGAAAGCTTTGGTTATGGCCATGGAGAAGAAGAATGATAGGATGCTAGATTTGCTGCAGGAGTGCTTCAGTGAAGGCCTTATCACTACCAATCAGCTGACCAAAGGATTCACCCGGATTAAGGATGGTCTTGATGATCTGGCTCTAGACATTCCAAATGCCAAGGAAAAATTTGCTTTCTATATGGAGCATGCCCAGACCAAGGGGTGGCTTCTACCATCATTTGATTCCTCTGCCGCAGATGTCTAA 2112 0.4527 MASNEGFLTEGQREMLKIASQNAENLSSSPKSPSSLLADHHHIKAPAGGKAQTAGIAVRHVRKSHSGKYGRAKKDGAGGKGTWGKLMDTEVDSHLDRNDPNYDSGEEPYQLVGTTVTDPLDEFKKAVVSLIEEYFSNGDVDLAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPTQIRDGFFMLIESADDLAVDILDAVDILALFLARAVVDDILPPAFLARARKALPESSKGAQVVKTAEKSYLSAPHHAELVERRWGGSTHITVEEMKKKIADILKEYVDSGETLEACRCIRELGVAFFHHEVVKKALVLAMEIPSAEPLLLKLLKEAAEEGLISSSQMVKGFSRLEEGLDDLALDIPSAKVLFQSFIPKAISEGWLDVSFANPAGEDGEFQVEDEKVRKYKKEAVTIIHEYFLSDDIPELIRSLEDLGAPEYNSIFLKRLITLALDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLENAEDTTLDILDASSELALFLARAVIDDVLAPLNLDEIGSRLPPMCSGRETVRMARTLSSARHAGERLLRCWGGGTGWAVEDAKDKITKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITTNQLTKGFTRIKDGLDDLALDIPNAKEKFAFYMEHAQTKGWLLPSFDSSAADV* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4024 703 MobiDBLite consensus disorder prediction 61 85 - -
Mal5g4024 703 ProSiteProfiles MI domain profile. 122 243 IPR003891 -
Mal5g4024 703 SUPERFAMILY ARM repeat 580 697 IPR016024 -
Mal5g4024 703 SUPERFAMILY ARM repeat 283 404 IPR016024 -
Mal5g4024 703 MobiDBLite consensus disorder prediction 15 35 - -
Mal5g4024 703 MobiDBLite consensus disorder prediction 1 37 - -
Mal5g4024 703 Gene3D - 571 700 - -
Mal5g4024 703 Gene3D - 273 405 - -
Mal5g4024 703 SUPERFAMILY ARM repeat 418 576 IPR016024 -
Mal5g4024 703 ProSiteProfiles MI domain profile. 286 407 IPR003891 -
Mal5g4024 703 Gene3D - 410 563 - -
Mal5g4024 703 Gene3D - 115 263 - -
Mal5g4024 703 ProSiteProfiles MI domain profile. 583 702 IPR003891 -
Mal5g4024 703 SUPERFAMILY ARM repeat 120 280 IPR016024 -
Mal5g4024 703 SMART ma3_7 421 532 IPR003891 -
Mal5g4024 703 SMART ma3_7 584 693 IPR003891 -
Mal5g4024 703 SMART ma3_7 287 398 IPR003891 -
Mal5g4024 703 SMART ma3_7 123 234 IPR003891 -
Mal5g4024 703 PANTHER PROGRAMMED CELL DEATH 4 1 695 IPR039778 GO:0045892
Mal5g4024 703 ProSiteProfiles MI domain profile. 420 541 IPR003891 -
Mal5g4024 703 PANTHER PROGRAMMED CELL DEATH PROTEIN 4-LIKE 1 695 - -
Mal5g4024 703 Pfam MA3 domain 288 398 IPR003891 -
Mal5g4024 703 Pfam MA3 domain 123 234 IPR003891 -
Mal5g4024 703 Pfam MA3 domain 422 531 IPR003891 -
Mal5g4024 703 Pfam MA3 domain 585 692 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4024 Mal-Chr5 109960910 109964322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4024 587 680 Eukaryotic Initiation Factors Gene Family AT5G57870 32.990 1.35e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4024 - - gmx:100809081 1211.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4024 5 109960910 109964322 Mal5g4024 5 109960910 109964322 ECH