Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4017 ATGAAGAAGGTCACAGTAATTGTGTCCATTCTTCTGTTACAATTCCTCCATGTATCTCCCTCGCCTCTCTTACACGGAAATCAGGTATATGAGGAATCTTCTGGTGGAAGTAGAAATCTTAAACAGGAGCAAGGGCATGCTCCTGAAGTGCATTGCTCCAGAGAGAGAAGTAGGGTTGCTTGGAAAGTGATTGAGGAGTATTTGACACCATTTGTGGAAAAAGAAAATTATCAGCTTTCAAGAAAGTGCAGACTTCACCCTGAGAATGATATGTTTAGGGATCAAGAAGAGCATAGAATTTACATAGACATAAATGAATGGCGATGTGGATATTGCAAGAAAAGCTTCCGTGAAGAAAAGTTTCTTGATCAGCATTTTGATAACAGACACTACAATCTTCTGGATCTAAGTCATGGAAAATGTTTGGCTGATTTATGTGGGGCATTGCATTGTGATGCTGTGATGAATTCCAAATCCTCTAGAAGCAAGTGTAATCCAGCAGCTGCTGCAAGAAACCGTCACCTATGTGAGAGTCTTGCTGACAGTTGTTTTCCTATAAGCGAGGGTCCATCAGCAAGCCGTCTTCATGAATTGTTTCTGCACCAATTTTGTGATGCTCACTCCTGCTCAGGGAAACACAAACCCTTCTCTAGAGGAGGCAAGGACCAAGGAAGTTTCTTTCGCCTGGCTGCCGCAGCATTGATTTTAGTTCTACTTCCTGTGTTCTATCTCTTTCTTTATTTGATACAAAGTGATATGAAGGGTCGAACTCAAGAGCTTCGTCGCATCTCCAAAGCTGGATGGAAAGCAAAGCCATCGTGA 822 0.4221 MKKVTVIVSILLLQFLHVSPSPLLHGNQVYEESSGGSRNLKQEQGHAPEVHCSRERSRVAWKVIEEYLTPFVEKENYQLSRKCRLHPENDMFRDQEEHRIYIDINEWRCGYCKKSFREEKFLDQHFDNRHYNLLDLSHGKCLADLCGALHCDAVMNSKSSRSKCNPAAAARNRHLCESLADSCFPISEGPSASRLHELFLHQFCDAHSCSGKHKPFSRGGKDQGSFFRLAAAALILVLLPVFYLFLYLIQSDMKGRTQELRRISKAGWKAKPS* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4017 273 ProSiteProfiles Zinc finger C2H2 type domain profile. 107 130 IPR013087 -
Mal5g4017 273 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 273 - -
Mal5g4017 273 ProSitePatterns Zinc finger C2H2 type domain signature. 109 130 IPR013087 -
Mal5g4017 273 PANTHER ZINC FINGER PROTEIN-RELATED 8 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4017 Mal-Chr5 109891114 109894309 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4017 27 273 C2H2 Transcription Factor Family AT5G63280 61.694 1.77e-110 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4017 - - ccaj:109814494 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4017 5 109891114 109894309 Mal5g4017 5 109891114 109894309 ECH