Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4010 ATGTCACCTGCACTTTATGCTAGTACCTTCAAATGTGAGGTAGATGAAAATCCATCACCATCACTAATGGGTTCTTACTATGCTTCTTTATATCCAAATTTACCTATTTTAGAAAACAGTGCTAGTTCAACATGGATCCTTAATCCATTTTCTGATCATGAAACTGAAACCATTAGGGATCACAAGAAATTGAAAAGATCAACCATGACTATCCCTATTTGGTTTGCAAATTTCAGCAGTCACAGTAATAGTTTCTTCAACAATATCAACAGCAGCAACAATAACAACAGTGTGAATAGCATTCCAAGGCTTCATTTTAGAGATCACATAAGAACTTATAAACAAAGATATTTTGCTGCTGAAGCTGTTGAAGAAGCAGCAGAAGATAATTTCAACTACAATAATTGTGAAGCTGAAGAAGATGGTTCATGTGCTGATGGAATGAGGCTAGTTCAACTTTTAATTGCTTGTGCTGAAGCTGTCGCGTGTCGCGACAAATCACACGCTTCGGTTTTATTATCCGAGCTTAAATCGAATGCTTTGGTATTTGGTTCTTCATTTCAAAGAGTTGCTTCTTGTTTTGTTCAAGGATTAACAGAGAGATTAACTCTGATTCAACCAATTGGTAATAATTCTGTTGGATCAGATACAAAATCAATGATGAACATAATGGATGCTGCATCAGAAGAAATGGAAGAAGCATTCAAGTTGGTTTATGAAAATTGTCCACATATTCAATTTGGACATTTTGTGGCTAATTCCATAATATTGGAAGCCTTTGAGGGTGAGAGTTTTGTTCATGTGGTTGATCTCGGCATGAGCCTTGGTCTTCCACATGGACACCAATGGCGAGGACTAATTCAAAGTCTCGCAGATCGATCCAGCCACCTTGTTCGGCGGCTTAGGATCACAGCGGTTGGTCTATGCATTGCTAGAATCCAAGTCATTGGTGAAGAACTCTCAATTTACGCGAAAAATTTGGGGATTCATTTGGAATTCTCAATTGTTGAGAAGAATTTGGAGAATTTGAAACCTGAAGACATAAAAGTGAATGAAAAAGAAGTTCTTGTGGTTAACAGCATTCTTCAATTGCATTGTGTTGTGAAAGAGAGCCGTGGCGCTTTGAATTCGGTTTTACAAATGATCCACGGCCTTTCGCCGAAAGTGCTAGTGATGGTTGAGCAAGATTCAGGTCACAATGGACCTTTTTTCCTTGGAAGGTTTATGGAATCATTGCATTATTATTCTGCTATTTTTGACTCATTGGATGCTATGCTGCCAAAGTATGATACTAAGAGAGCAAAAATGGAACAGTTTTATTTTGCTGAGGAGATAAAGAACATTGTGAGCTGTGAAGGACCATTGAGGATGGAGAGGCATGAGAAAGTTGATCAGTGGAGGAGAAGAATGAGTAGGGCTGGATTTCAAGGTGCACCTATTAAGATGGTTGTTCAAGCTAAACAGTGGCTTTTGAAGACTAAGGTTTGTGATGGATACACTGTTGTGGAAGAGAAAGGGTGTTTGGTTCTTGGATGGAAATCAAAGCCTATTGTTGCAGTTTCTTGCTGGAAATGCTGA 1578 0.3853 MSPALYASTFKCEVDENPSPSLMGSYYASLYPNLPILENSASSTWILNPFSDHETETIRDHKKLKRSTMTIPIWFANFSSHSNSFFNNINSSNNNNSVNSIPRLHFRDHIRTYKQRYFAAEAVEEAAEDNFNYNNCEAEEDGSCADGMRLVQLLIACAEAVACRDKSHASVLLSELKSNALVFGSSFQRVASCFVQGLTERLTLIQPIGNNSVGSDTKSMMNIMDAASEEMEEAFKLVYENCPHIQFGHFVANSIILEAFEGESFVHVVDLGMSLGLPHGHQWRGLIQSLADRSSHLVRRLRITAVGLCIARIQVIGEELSIYAKNLGIHLEFSIVEKNLENLKPEDIKVNEKEVLVVNSILQLHCVVKESRGALNSVLQMIHGLSPKVLVMVEQDSGHNGPFFLGRFMESLHYYSAIFDSLDAMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHEKVDQWRRRMSRAGFQGAPIKMVVQAKQWLLKTKVCDGYTVVEEKGCLVLGWKSKPIVAVSCWKC* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4010 525 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 74 524 IPR005202 -
Mal5g4010 525 PANTHER DELLA PROTEIN RGL1-LIKE 74 524 - -
Mal5g4010 525 ProSiteProfiles GRAS family profile. 141 524 IPR005202 -
Mal5g4010 525 Pfam GRAS domain family 150 524 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4010 Mal-Chr5 109822072 109823649 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4010 147 525 GRAS Transcription Factor Family AT1G66350 37.337 3.47e-76 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal5g4010 GRAS 3e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4010 - - gmx:100813548 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4010 5 109822072 109823649 Mal5g4010 5 109822072 109823649 ECH