Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4007 ATGTTAGATCTTAATCTAAATGACGATTACGAAGACTCGATCATGCTGGTGGAAAAACTTCCAGAAGCTTCATCAGGAACTTCAAATTCATCCATAGTGAATGCAGAGGCTTCAAGTAACATCACCGGTGATGAAGACTCGTGTTCAACATGCGCCGGTGGTGTTTTCACTTTCAAATTGGTATTTGGTTTTGTAGGTGGATTTGACACGGCTCATGCTGCTGCTAGAGCCTATGATCGAGCTGCTATAAAGTTCAGGGGACTTGATGCTGACATTAATTTCAATCTGGTTGAGTATGAGGAAGACATGAATCAGATGAAGAATTTTTCGAAGGAGGAATTTGTGCACATACTACGTCGCCACAGTAATGGTTTCTCACGGGGAGTTCAAAATACAGAGGAGTAA 405 0.4173 MLDLNLNDDYEDSIMLVEKLPEASSGTSNSSIVNAEASSNITGDEDSCSTCAGGVFTFKLVFGFVGGFDTAHAAARAYDRAAIKFRGLDADINFNLVEYEEDMNQMKNFSKEEFVHILRRHSNGFSRGVQNTEE* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4007 134 Gene3D AP2/ERF domain 59 97 IPR036955 GO:0003700|GO:0006355
Mal5g4007 134 ProSiteProfiles AP2/ERF domain profile. 64 95 IPR001471 GO:0003700|GO:0006355
Mal5g4007 134 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 65 128 - -
Mal5g4007 134 SMART rav1_2 53 101 IPR001471 GO:0003700|GO:0006355
Mal5g4007 134 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 65 128 - -
Mal5g4007 134 SUPERFAMILY DNA-binding domain 64 95 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4007 Mal-Chr5 109773843 109774512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4007 64 128 AP2-EREBP Transcription Factor Family AT2G39250 64.615 1.95e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4007 K09284 - gmx:100777102 116.316