Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3998 ATGGACATGGAGAGGGATGGCTTTCCAATTTCAGCCTTGAGAGAAATGAATATTCTCTTGTCCTTAGACCATCCCTCTATTGTAGATGTTAAAGAAGTAGTCGTGGATGATAATGATAGCCATGATGGTACCTATATGGTAATGGAGCATATGCAGTATGACCTTAAGCAGTTAATGGAGGCAAAGACACAGCCTTTCAGTATGGGCGAGATAAAATCCTTCGTGAAGCAACTTCTTGAAGGAGTCAAGTATCTCCATGATAACTGGATTCTCCATAGGGATTTGAAGACATCTAACATTCTGCTGAACAAAGATGGGCAGTTGAAAATATGTGACTTTGGAATGTCAAGGCAGTATGGAAGCCCTCTGAAGCAGTATACTTCTCTGGTCGTTACACTATGGTACAGGGCACCTGAACTTTTGTTGGGCGCTAAAAAATACTCCAAAGCAATTGATATGTGGTCGGTCGGCTGTATAATGGCCGAATTAATTTCCAAGGAGCCACTTTTCAAGGGTAAAACTGAAGTTGAACAACTTGACAAGATTTTTCGAACTCTTGGTACACCAGATGAGAAAGTATGGCCAGGATTATCCAAATTGCCTGGTTCTAAAGCAAATTTTGTTAAGCAACGGTGTAGTATGCTAAGGATGAAGTTTCCAGCTGCATCTTTCACTGGTTTGCCAGTTTTATCTGAGTCGGGATTTGACTTGTTGAATAAACTTCTAGCTTATGATCCTGATAAGAGGATATCTGCTGAAGCTGCTCTGCAGCATGATTGGTTTCGTGAAGGTCCACTTCCCAGATCTGATTGCAATCCTAATTTTTCTTCATGGTAG 837 0.411 MDMERDGFPISALREMNILLSLDHPSIVDVKEVVVDDNDSHDGTYMVMEHMQYDLKQLMEAKTQPFSMGEIKSFVKQLLEGVKYLHDNWILHRDLKTSNILLNKDGQLKICDFGMSRQYGSPLKQYTSLVVTLWYRAPELLLGAKKYSKAIDMWSVGCIMAELISKEPLFKGKTEVEQLDKIFRTLGTPDEKVWPGLSKLPGSKANFVKQRCSMLRMKFPAASFTGLPVLSESGFDLLNKLLAYDPDKRISAEAALQHDWFREGPLPRSDCNPNFSSW* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3998 278 Pfam Protein kinase domain 10 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3998 278 SMART serkin_6 1 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3998 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 90 102 IPR008271 GO:0004672|GO:0006468
Mal5g3998 278 PANTHER CYCLIN-DEPENDENT KINASE 1 278 - -
Mal5g3998 278 PANTHER CELL DIVISION PROTEIN KINASE 1 278 - -
Mal5g3998 278 ProSiteProfiles Protein kinase domain profile. 1 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3998 278 Gene3D Transferase(Phosphotransferase) domain 1 51 273 - -
Mal5g3998 278 Gene3D Phosphorylase Kinase; domain 1 3 50 - -
Mal5g3998 278 SUPERFAMILY Protein kinase-like (PK-like) 5 266 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3998 Mal-Chr5 109669900 109671037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3998 1 273 Core Cell Cycle Gene Families AT5G10270 45.105 3.24e-76 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Mal5g3998 Pkinase 3.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3998 K08818 - gmx:100788840 444.121