Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3995 ATGGCTACTTCTAATTCCATTTCCCTATGTTCTCACAATCTCCATTATTATACCAGATTTCATCGCCTTCATCCTACGCAGCGTTCCCGTTATTGCTCTTTTCGTTCCAATGCTGCTCTCCCAAATACTGATGGAGCCAAAGTAGTGCACAAAAGAGCAAGAAGAAGAATAGAAGGTCCTAGAAAAAGTATGGAAGACTCTGTTCAGCGTAAGATGGAGCAATTTTACGAAGGATCGGATGGACCACCCCTTCGAGTTCTTCCTATTGGTGGGTTGGGTGAAATTGGGATGAATTGCATGCTTGTTGGGAACCATGATCGTTATATCCTCATTGACGCAGGTGTCATGTTTCCAGGCGATGATGAGCTTGGGGTTCAAAAGATAATACCTGATACAACATTTATTAAAAAATGGAGCCACAAAATTGAAGCAGTAGTTATAACACACGGTCATGAAGATCATATTGGTGCATTGCCTTGGGTCATCCCAGTGTTGGATTCTCAAACACCAATTTTTGCATCATCATTTACAATGGAGCTTATGAGAAAACGTTTGAAGGATCATGGTATTTTTGTTCCATCCCGATTAAAAGTATTTAGAACAAGGAAGAAGTTTTTAGCTGGGCCATTTGAGATAGAGCCTATCACAATGAATCATTCTATTCCGGATTGCTGTGGATTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCACACTGGCGATTGGAAGATTGATGAAACACCATTAGATGGTAAAGTTTTTGATCGGGAAGCTCTAGAGGAACTGTCCAAAGAAGGAGTCACATTGATGATGAGTGATTCTACAAATGTACTCTCACCTGGAAGGACAATGAGCGAGTCTGTTGTAGCTGATGCATTATTAAGGCATATTTCAGCTGCTAAAGGAAGGGTTATAACAACCCAGTTTGCATCAAATATTCATCGTCTTGGAAGTGTGAAAGCTGCTGCTGATCTGACTGGCAGAAAGTTGGTATTTGCTGGCATGTCTTTAAGGACATATTTGGATGCAGCCTGGAAGGATGGAAAGGCTCCAATTGATCCATCCACTCTGGTGAAAGTAGAGGATATTGATGCTTATGCGCCTAAGGATTTGCTGATTGTGACAACGGGTTCTCAAGCAGAACCACGTGCTGCCTTGAACCTTGCATCTTACGGAAGTAGTCATGCTTTCAAACTGACAAAGGAAGACGTTGTGTTGTATTCAGCTAAGGTTATCCCCGGTAATGAGTCTCGTGTTATGGAAATGCTAAACCGCATATCAGAGATTGGACCAACAATAGTCATGGGGAAGAAAGAATGCCTACACACATCTGGTCATGGATATCGTGGTGAATTGGAGGAAGTACTTAGAATTGTGAAGCCACAGCATTTTCTTCCCATACATGGAGAACTCTTGTTCTTGAAGGAGCATGAATTACTTGGAAAATCAACTGGCATTCGACACACTGCTGTTATTAAGAATGGAGAGATGCTTGGCGTTTCACATTTGAGAAATAGAAAAGTCCTTTCTAATGGTTTTATTTCCCTTGGAAAAGAGAATTTGGAGTTGAAGTATAGTGATGGTGACAAAGCATTTGGTACATCAAGCGAACTCTTCATTGATGAAAGATTAAGAATTGCATTAGATGGCATCATTGTGGTTAGCATGGAAGTATGTCGCCCTCAAAGTTTAGACAGTTCAGTTGAAAACACCTTAAAAGGAAAGATAAGAATTACCACAAGATGCCTATGGCTTGACAAAGGGAAGCTGTTGGACGCGCTGCATAAAGCTGCTCATGCTGCTCTCTCAAGCTGCCCTGTAAACTGCCCACTGGCTCACATGGAAAAAACTGTGTCTGAGATGTTGAGGAAAATGGTGAGGAAGTATAGTGGCAAACGGCCTGAAGTTATTACCGTTGCTATAGAAAATCCTGCAGCTGTTCTCGCTACTGAGATAAACACAAGGTTGTCTGGAAAATCCTATGCAGGTGGGATATCGACATTTAGAAATGTGGTGCATCGACACGGGAAAGAAAATCAATCCACCAAAATGCAAATGAGAGATGATGATAATGATGTTGAAAGTCTTCTACCTAAGGCAGATGCCACTACCTCAAATAGAGCTGCTAGTGATTTGTCAGAAACAGAGGATCCAGATGACTTATGGAAACCATTTGTTGAGCCCTCGCCAGTTGGTATGTCAACCAAAGCTAACAGTGGTTATATTCCACAACCGAAGTCTCAGCTGAAGAATGATGGTTCTGACGATGCTGAAGAAGGCCAGTCTGAAAAGACATCAGATTCTGAAACCAAATCTTCTAAATCAGTGATGAAAAACAAATGGAAAGAGGAGGAAGTTAAGAGGTTGATTGATGTGCGCGGGGAATTGAATGACAGATTTCAAATTGTGAAGGGAAAGAATATCCTCTGGGAAGAAATATCCAAGAACTTGTTGGCTTATGGCGTCAACAAAAATCCGGGGCAGTGTAAATCTATGTGGACATCTTTGTTACATAAATATGAGGAGATCAAGAATGAGAAGAACAGAGAGGAAATGTGGCTATATCTGGAGGACATGGAAAGGGTTATCTCTGGTAAGGAGGCACTAGCAAAAATATGA 2619 0.4135 MATSNSISLCSHNLHYYTRFHRLHPTQRSRYCSFRSNAALPNTDGAKVVHKRARRRIEGPRKSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPGDDELGVQKIIPDTTFIKKWSHKIEAVVITHGHEDHIGALPWVIPVLDSQTPIFASSFTMELMRKRLKDHGIFVPSRLKVFRTRKKFLAGPFEIEPITMNHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTMSESVVADALLRHISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFAGMSLRTYLDAAWKDGKAPIDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLTKEDVVLYSAKVIPGNESRVMEMLNRISEIGPTIVMGKKECLHTSGHGYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVSHLRNRKVLSNGFISLGKENLELKYSDGDKAFGTSSELFIDERLRIALDGIIVVSMEVCRPQSLDSSVENTLKGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPVNCPLAHMEKTVSEMLRKMVRKYSGKRPEVITVAIENPAAVLATEINTRLSGKSYAGGISTFRNVVHRHGKENQSTKMQMRDDDNDVESLLPKADATTSNRAASDLSETEDPDDLWKPFVEPSPVGMSTKANSGYIPQPKSQLKNDGSDDAEEGQSEKTSDSETKSSKSVMKNKWKEEEVKRLIDVRGELNDRFQIVKGKNILWEEISKNLLAYGVNKNPGQCKSMWTSLLHKYEEIKNEKNREEMWLYLEDMERVISGKEALAKI* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3995 872 ProSiteProfiles Myb-like domain profile. 773 837 IPR001005 -
Mal5g3995 872 Gene3D - 781 842 - -
Mal5g3995 872 PANTHER RIBONUCLEASE J 1 871 - -
Mal5g3995 872 Gene3D - 88 500 IPR036866 -
Mal5g3995 872 SMART Lactamase_B_5a 96 293 IPR001279 -
Mal5g3995 872 SUPERFAMILY Metallo-hydrolase/oxidoreductase 84 498 IPR036866 -
Mal5g3995 872 CDD RNaseJ_MBL-fold 87 498 - -
Mal5g3995 872 Pfam Myb/SANT-like DNA-binding domain 779 861 IPR044822 -
Mal5g3995 872 MobiDBLite consensus disorder prediction 732 750 - -
Mal5g3995 872 CDD GT1 779 844 - -
Mal5g3995 872 Pfam Metallo-beta-lactamase superfamily 97 242 IPR001279 -
Mal5g3995 872 Gene3D - 285 435 IPR042173 -
Mal5g3995 872 MobiDBLite consensus disorder prediction 751 778 - -
Mal5g3995 872 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 1 871 - -
Mal5g3995 872 MobiDBLite consensus disorder prediction 698 778 - -
Mal5g3995 872 SMART sant 777 839 IPR001005 -
Mal5g3995 872 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 438 478 IPR011108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3995 Mal-Chr5 109626986 109636501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3995 760 849 Trihelix Transcription Factor Family AT3G25990 26.667 5.11e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal5g3995 Lactamase_B 6.2e-11 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3995 - - cam:101513472 1374.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3995 5 109626986 109636501 Mal2g2497 2 31651339 31660016 PCT