Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3985 ATGGTTTCAACAAAACGCAGTGGATCTATGTCTTCGAAAAAATCATCACCCTCTAAGGATAATAATTCTCCTTCGCCAAAGCGTCCAAAGGTCGATAAAGGTGGTTCTCCGGGGAAACCAATGCCGCCGCAGAAACCAGGTTCGCCAGAGAAACCAGATTCGCCAGAGAAACCAGTTCCATCAGTGACTAATCATGGAGAATGCAGCTCTTGTGATGGTTTGATCACTGGAGTATGTGCAACAGATAGTGTGAAGACTACTAACAAAAATGTCGCAGTGTCAGCTCCATCTCCATGGTTCACATTATTGTCGCAGACTGCACAGCGTCGAAATGTGGAGGCTTTTGCATCGGAGCTTAGAATTGATTCTACTAAAAGTTGCAACTTTGTTTTGAGTGATCAACCTAAAAGTGGATGTTTATGCACAATAAAACGTACTGAGTGCTGGGGAAGTGATATAGCTGTGCTACAAAGTACTTGTAGTAAAGAATCAGTGCTAGTAAATGGGATACCCTTGAAGAAGAATACCAGTTGTATGCTTAACTCAGGTGATGAGGTGGAGTTTGGTGTGGTGGGAAATCATTCATATATTTTCAAGCAACTGAGTAATGAGGGTGCAAAAGTTCAAAGTGCGCGGTGCTCAGTGTTTAAAGAAAATGTTGGTGCTGCAATACTTGATGGAAAAGAAATAGACATGTCTTTTGACAACTTCCCCTACTATTTAAGCGAGAACACAAAAATTGTCTTGGTTGCTGCATGCTTCATACACTTGAAGCATAAAGAACTTCAGAAGTACACACCAAATCTTACTACCACAAACCCTGGCATTTTACTATCAGGGCCTACTGGCTCAGATATATATCAGGAAATGCTGGCAAAAGCACTTGCTGAATACTTTGGAGCTAAGTTGCTCATTTTTGACAGCCATTTGCTTTTGGGTGATAAAATACCATCCACCAATATGACAAGAAAAAAACACTTGTTCAAATTAGGTGACAGAGTGAAATTTATCCGGCGCCCTTCTTGTGGTTTGTATCAAACATCTTCAAGGGGTCCACCTAATGGTAGTTTGGGGAAAGTTGTGTTGCTTTTTGATGACAATCCTTTCTCTAAAATTGGTGTGAGATTTGATAAACTCATACCAGATGGGGTTAATCTTGGAGGTGCATGTGAGTTTGGTCAAGGCTATTTCTGCAATGTCACTGAACTACGTTTGCAAAGCAATGGTGGAGCAACATTAGACAAATTACTTATTGATTCATTATTTGAGGTTGTTTTTAGTGAGAGTAGAAATACACCATTCATTTTGTTCATGAAAGATGCTGAGGAGTCAATAGTTAGAAATGGAGATCCATTTTCATTTAGAAGCAAAATTCAAACACTTCCAAACAATGTGGTCGTAATAGGCTCATACACTCACAAGGAGAAGTCGCATCCCGAGGGTTTACCTATTACAAACTTTGATAGCAATGAGATTGCACTTCTTAACTTGGCAGCTATTGCAGGTATTCTTGAATGTTTGGATGAAAAGGAGAGGGAAGTTCCAAAGCCAAACAAAGCTTTAAATGTTATTTTCCCAAATAAAATTACAATTCAGATGCCACAGGATGAGACACTTCTAGCATCATGGAGACAACAATTAGATCGAGATGTAGAGGCTTTGAAAATCAAAGCAAATTTACAACAACTGCGCATTGTTTTGAGCCACCGTGGAATTGAATGTGAAGGACTTGAGACCTTGTGCATTAAAGATCAAGCACTTACAAATGAAAATGCGGATAAGATTATTGGTTGGGCTCTAAGCCACCACCTCATGCAGAATTCTGAAGTTAATTTAGACTCAAAGCTTGTATTGTCGTGTGAAAGCATCCATTATGGATTCAAGATCTTGCAGTCTCTCCAAAATGAGTCAAAAAGCATGAAGAACTCTCTTAAGGATATCGTAGCAGAAAATGAGTTTGAAAAGAGGCTTTTGGATGATGTTATTCCACCAAGAGACATTAATGTTACTTTTGATGATATTGGAGCTCTTGAAAACGTCAAGGATACTCTGAAGGAGTTGGTGATGCTTCCTTTACAGAGGCCCGAGCTTTTTTGTAAAGGACAATTAACCAAGCCATGCAAGGGTATCCTATTATTTGGTCCTCCCGGAACAGGTAAAACAATGCTTGCAAAGGCAATTGCAACTGAAGCTGGTGCAAACTTCATCAACATTTCTATGTCGAGCATTACATCTAAGTGGTTTGGCGAGGGTGAGAAGTACGTGAAAGCTATTTTCTCTTTGGCGAGTAAAATGGCTCCTAGTGTTATATTTGTTGATGAAGTTGACAGCATGTTGGGTCGAAGAGAAAATCCAGGGGAGCATGAATCTATGCGGAAGATGAAAAATGAATTCATGGTTAATTGGGATGGTCTACGTACAAAGGATACTGAACGAGTTATTGTGCTTGCTGCCACTAACAGACCTTTTGACCTAGATGAGGCTGTCATTAGGAGGCTGCCAAGAAGATTGATGGTAAATCATCCCGATGCTCCAAATAGAGCGAAAATATTGAAAGTTATACTTGCAAAAGAGGATTTGTCCCCTGATGTTGATTTAGATGCAGTTGCAAGCATGACTGATGGATATTCCGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCACATTGTCCAATTAAAGAGATATTAGAAAAGGAAAAAAAGGATCATGCTACTGCTCTAGAAGAAGGTCGGCCTGTTCCTGCACTATGTAACAGTGGGGACATTCGATCTTTAAACATGGCAGACTTTAAATATGCTCACCAACAGGTTTCTGCCAGTGTTTCTTCTGAATCAGTAAATATGGCTGAGCTTAAACAATGGAATGAACTATATGGAGAAGGTGGTTCAAGAGTAAAGAAATCGTTCAGCTATTTCTCGTGA 2925 0.3979 MVSTKRSGSMSSKKSSPSKDNNSPSPKRPKVDKGGSPGKPMPPQKPGSPEKPDSPEKPVPSVTNHGECSSCDGLITGVCATDSVKTTNKNVAVSAPSPWFTLLSQTAQRRNVEAFASELRIDSTKSCNFVLSDQPKSGCLCTIKRTECWGSDIAVLQSTCSKESVLVNGIPLKKNTSCMLNSGDEVEFGVVGNHSYIFKQLSNEGAKVQSARCSVFKENVGAAILDGKEIDMSFDNFPYYLSENTKIVLVAACFIHLKHKELQKYTPNLTTTNPGILLSGPTGSDIYQEMLAKALAEYFGAKLLIFDSHLLLGDKIPSTNMTRKKHLFKLGDRVKFIRRPSCGLYQTSSRGPPNGSLGKVVLLFDDNPFSKIGVRFDKLIPDGVNLGGACEFGQGYFCNVTELRLQSNGGATLDKLLIDSLFEVVFSESRNTPFILFMKDAEESIVRNGDPFSFRSKIQTLPNNVVVIGSYTHKEKSHPEGLPITNFDSNEIALLNLAAIAGILECLDEKEREVPKPNKALNVIFPNKITIQMPQDETLLASWRQQLDRDVEALKIKANLQQLRIVLSHRGIECEGLETLCIKDQALTNENADKIIGWALSHHLMQNSEVNLDSKLVLSCESIHYGFKILQSLQNESKSMKNSLKDIVAENEFEKRLLDDVIPPRDINVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAIATEAGANFINISMSSITSKWFGEGEKYVKAIFSLASKMAPSVIFVDEVDSMLGRRENPGEHESMRKMKNEFMVNWDGLRTKDTERVIVLAATNRPFDLDEAVIRRLPRRLMVNHPDAPNRAKILKVILAKEDLSPDVDLDAVASMTDGYSGSDLKNLCVTAAHCPIKEILEKEKKDHATALEEGRPVPALCNSGDIRSLNMADFKYAHQQVSASVSSESVNMAELKQWNELYGEGGSRVKKSFSYFS* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3985 974 Pfam ATPase family associated with various cellular activities (AAA) 710 839 IPR003959 GO:0005524|GO:0016887
Mal5g3985 974 Gene3D - 668 948 IPR027417 -
Mal5g3985 974 Gene3D - 842 936 - -
Mal5g3985 974 SUPERFAMILY SMAD/FHA domain 98 193 IPR008984 GO:0005515
Mal5g3985 974 Pfam AAA+ lid domain 863 900 IPR041569 -
Mal5g3985 974 Gene3D - 98 208 - -
Mal5g3985 974 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 668 944 IPR027417 -
Mal5g3985 974 SMART AAA_5 706 843 IPR003593 -
Mal5g3985 974 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 208 317 - -
Mal5g3985 974 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 69 207 - -
Mal5g3985 974 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 319 973 - -
Mal5g3985 974 MobiDBLite consensus disorder prediction 1 24 - -
Mal5g3985 974 Coils Coil 630 650 - -
Mal5g3985 974 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN-RELATED 208 317 - -
Mal5g3985 974 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN-RELATED 69 207 - -
Mal5g3985 974 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN-RELATED 319 973 - -
Mal5g3985 974 ProSitePatterns AAA-protein family signature. 813 832 IPR003960 GO:0005524|GO:0016887
Mal5g3985 974 CDD AAA 708 840 - -
Mal5g3985 974 MobiDBLite consensus disorder prediction 1 64 - -
Mal5g3985 974 CDD FHA 123 199 IPR000253 GO:0005515
Mal5g3985 974 MobiDBLite consensus disorder prediction 39 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3985 Mal-Chr5 109554079 109562666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3985 705 911 Calmodulin-binding Proteins AT3G56690 36.019 1.39e-31 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3985 - - han:110873270 1049.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3985 5 109554079 109562666 Mal2g2501 2 31679303 31690683 PCT