Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3978 ATGTCTTCATCCATTTGTCATGTGTTGATGTCACTTCTTCTTTTTGTTTTGCTGCAGGAACATACCCTTGCAATTAAACAGTCCTATATTGTATACTTAGGATCACATTCTTTCGGTCCAAATCCTTCACCATTTGATTTTGAACTTGCAACGAACTCTCACTATGATATTCTTGGATCTTACGTTGGAAGCACCGAAAAGGCCAAAGAAGCAATATTTTACTCATATAATAGATATATTAATGGATTTGCTGCAATACTTGATGAAGATGAAGCAACGAAACTTGCGAATCATCCGAATGTAGTATCAATTTATTTAAACAAAAAATATGAACTACACACAACCAGGTCGTGGGATTTCCTTGGGTTAGAGAGAGATGGTGGATTTCCAAAGGATTCATTGTGGAAGAAATCACTTGGCAATGACATTATTATTGGAAATTTAGACACTGGTGTTTGGCCAGAATCCAAGAGTTTTAGTGATGAAGGGTTTGGACCAATCCCAAAAAAGTGGCGTGGAATCTGTCAAGTTACTAAAGGGAATCCAGATAACTTTCACTGCAATAGGAAGCTTATTGGAGCAAGATATTTTTATAAAGGCTATCTGTCAAGTCCTATTAGCACCCTAAATGTCTCATTTGATAGTGCACGTGACACTGAAGGTCATGGTTCACATACTTTATCAACTGCTGGAGGAAATTTTATTGCAAATACAAATGTATTTGGCTATGGAAATGGTACAGCAAGTGGTGGATCACCAAAGGCGCGAGTCGCGGCCTATAAGGTTTGTTGGGGTGGATGTTATGACGCCGACATTTTGGCTGGTTTTGAAGCTGCCATAAGTGATGGTGTTGATGTGCTTTCAGTGTCTTTGGGTGGTGATTCATCTAGAGAAACTTACCAAAGCACTATTTCCATAGGGTCTTTCCATGCAGTTGCCAACAACATCATTGTTGTGACTTCTGCAGGAAATTCAGGACCTGCTCCCTTTAGTGTATCCAACTTGGAACCTTGGACACTTACTGTTGCTGCAAGCACAATTGATAGAGATTTCACAAGTTATGTTATTATTGGTAACAAGAAAATAATCAAGGGAGCTAGCCTTTCACAGCTTTACTTACCACCTCATAAGTTGTACCCATTGATAAGTGCTGCTGATGCCAAGGTTGATGATGTATCTGCCGAAGATGCCCTTCTTTGTAAGGAGGGAGCTCTTGATCCTCGTAAGGCAAAGGGAAAAATATTGGTGTGTCTTCGAGGTGAGAGCAATAGAGTTGACAAGGGTGTGCAAGCTTCTCGCGTAGGTGCTATTGGAATGATTTTGGCTAATGACGAGGGTTCAGGCGGGGAAACTATAGCCGACGCTCATGTGCTTCCCGCTTCACATGTTAACTTTAAAGATGGAAATTTCATTTTTAAATACGTCAATAACACCAAGTCTCGTGTAGCTTACCTTACTAGAGTTAAAACACAGTTGGGTGTAAAGGCAGCTCCATCTATGGCTGCATTTTCATCAAGAGGACCAAATATCCTTGATCCTACAATCCTCAAGCCGGATATCACTGCACCAGGAGTCAACATAATTGCAGCTTATAGTGAAGCTTTATCTCCTACAGAAAGTGAATCTGATAAGCGTAGAACTCCGTTTAATACTATGTCAGGAACTTCGATGTCATGTCCTCATGTTGCCGGACTTGTTGGGCTGCTTAAATCAATCCATCCTAAGTGGAGTCCAGCTGCTATCAAGTCAGCAATCATGACTACAGCAACAACAAAGGACAACATTGGAGGGCCTGTGTTGGATTCATCACAAGAAGAAGCAACTCCTAATGACTATGGTGCTGGACACGTTCGACCTAATCATGCCGCGGATCCTGGACTTGTTTATGACCTAAATATAACTGATTATTTGAACTATTTATGTGGTCATGGAATCAACAGTTCAACACTTAAACTGTTCTATAGAAGACCTTACACTTGTCCCAAATCCTTCAATTTACTAGATTTCAATTATCCAGCCATCACAATTCCGAACTTTAAAATTGGTCAGCCATTGACAGTTACTCGTACTTTAACCAATGTTGGATCTCCAAGTAAGTATAGAGTTCTTATACAAGCACCTTCAGAATTTCTAGTTTCAGTGAAGCCCGAGACACTACATTTTAAGAAGAAGGGTGAAAAAAGAAAGTTCAAGGTTACATTAACCTTGAAGAAAGGAACTACATATAAGACTGATTACGTCTTTGGAAAATTGGTTTGGACCGATGGAAAACACCGAGTTGGGACTCCTATTGCAATAAAGTATCCACATTAG 2313 0.4003 MSSSICHVLMSLLLFVLLQEHTLAIKQSYIVYLGSHSFGPNPSPFDFELATNSHYDILGSYVGSTEKAKEAIFYSYNRYINGFAAILDEDEATKLANHPNVVSIYLNKKYELHTTRSWDFLGLERDGGFPKDSLWKKSLGNDIIIGNLDTGVWPESKSFSDEGFGPIPKKWRGICQVTKGNPDNFHCNRKLIGARYFYKGYLSSPISTLNVSFDSARDTEGHGSHTLSTAGGNFIANTNVFGYGNGTASGGSPKARVAAYKVCWGGCYDADILAGFEAAISDGVDVLSVSLGGDSSRETYQSTISIGSFHAVANNIIVVTSAGNSGPAPFSVSNLEPWTLTVAASTIDRDFTSYVIIGNKKIIKGASLSQLYLPPHKLYPLISAADAKVDDVSAEDALLCKEGALDPRKAKGKILVCLRGESNRVDKGVQASRVGAIGMILANDEGSGGETIADAHVLPASHVNFKDGNFIFKYVNNTKSRVAYLTRVKTQLGVKAAPSMAAFSSRGPNILDPTILKPDITAPGVNIIAAYSEALSPTESESDKRRTPFNTMSGTSMSCPHVAGLVGLLKSIHPKWSPAAIKSAIMTTATTKDNIGGPVLDSSQEEATPNDYGAGHVRPNHAADPGLVYDLNITDYLNYLCGHGINSSTLKLFYRRPYTCPKSFNLLDFNYPAITIPNFKIGQPLTVTRTLTNVGSPSKYRVLIQAPSEFLVSVKPETLHFKKKGEKRKFKVTLTLKKGTTYKTDYVFGKLVWTDGKHRVGTPIAIKYPH* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3978 770 Pfam Fibronectin type-III domain 668 766 IPR041469 -
Mal5g3978 770 SUPERFAMILY PA domain 407 479 IPR046450 -
Mal5g3978 770 CDD Peptidases_S8_3 110 590 IPR034197 -
Mal5g3978 770 CDD PA_subtilisin_like 354 485 - -
Mal5g3978 770 Pfam Subtilase family 140 615 IPR000209 GO:0006508|GO:0008236
Mal5g3978 770 SUPERFAMILY Subtilisin-like 112 627 IPR036852 GO:0004252|GO:0006508
Mal5g3978 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 24 766 IPR045051 -
Mal5g3978 770 PRINTS Subtilisin serine protease family (S8) signature 553 569 IPR015500 -
Mal5g3978 770 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Mal5g3978 770 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Mal5g3978 770 Gene3D - 640 768 - -
Mal5g3978 770 Pfam PA domain 398 469 IPR003137 -
Mal5g3978 770 Gene3D - 348 492 - -
Mal5g3978 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 554 564 IPR023828 -
Mal5g3978 770 Gene3D Peptidase S8/S53 domain 142 636 IPR036852 GO:0004252|GO:0006508
Mal5g3978 770 Pfam Peptidase inhibitor I9 28 113 IPR010259 -
Mal5g3978 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 113 IPR037045 -
Mal5g3978 770 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.3 24 766 - -
Mal5g3978 770 ProSiteProfiles Serine proteases, subtilase domain profile. 117 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3978 Mal-Chr5 109420516 109424904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3978 23 767 Subtilisin-like Serine Gene Family AT5G59810 57.048 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3978 - - vun:114175516 1021.54