Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3967 ATGGGAAAGGCATCAAGGTGGTTTCGAGGCCTTCTTGGTCTTAAAAAACCAGAACATGCCTCTAATGACCAGAAACCACCCAAGGAGAAACGAAGATGGAGTTTCGTAAAATCATACAGAGAAGGAGAACAACAACAACAACAACAACAACAACGCAACAGCCACGTAACCTTAGAAACAGAACATGTCAACAACAACAATAACAACAAACAAGCCATTGCAGTCGCTGCTGTCACAACACGGACAGCAGCGACTGCAGAGGCTTCGGTAGCCGCTAACTTTGTCAGATTCAATTATAGCAGTAACGGAATCGTTAGGATACGTGAACAATGGGCTGCCGTTAAGATCCAAGCCGCTTTTCGTGGAAGTTTGGCAAGGAAGGCGCTGCGAGCATTAAAAGGGCTGGTGAAACTACAGGCACTGGTGAGAGGTCACATTGAGAGGAAACGAACAGCAGAGTGGCTTAAAAGAATGCAATCACTTTTACGGGCACAGGCACGATTTAATGCAGCACGAACCCTGCATACCTCACATTTGAATGCAAAATCATCTACACTCCACCTCCATGGTCCAGCAACACCAGAAAAATCTGAAAGCCCTGCTAGATCTAGGAGCATGAAATCTGAGCATTCACCTGTACTCAAGAGAAATGGTTCCAAATCATGTCTACTGAACAGCGGCAACATATCCGAACATCAGTTAGACGAACAATCATGGAATAGAGTAAGATCACTTATAAGAACATATAGCAGGAGTGACGAAAAAAGTGATAGGATTGTCGAAATTGATTCTGGAAAACAACACATCAACGCAAAACGCAGAAACCTCTTTTACTCCACAAGTGATACTGATTATTATTATAGTCAAAATTTGACCCCTTCAAAGGAATCGAAATCTCATCAATCTGGTCAAAGTGTATCTTGTGAGGTTCAATCTTATTACAATCCACTAAAACTCAACGAAGTTGAAGAGAGCTCATTTTGTACTGCAAACAATAGTCCTCAATTTTTATCATCTGCAACTTCAAAAGATGATGGTTACAAAAGAAGCCCTTTTACTCCTACAAAAAGTGATGGCTCAAGAGGTTACCTTAGAGGCTATTCTGATTACCCAAGTTACATGGCTTATACCGAGTCATCAAAGGCTAAAGTTAGATCTCTAAGTGCACCAAAACAAAGGCCTCAATTCGATAAATCTGGTTCGTCTAATAGGTACTCACTCAATGGACACGACATGGCAAGATTGGCCGCAATGAGAACATCTGCATTGCAAACAAGCTTCACAAGCAAAGGCTATCCTGGTTCTGGTCGTTTGGATAAGCTTGGAATGCCTGTGGGCTATAGATATTGA 1350 0.4207 MGKASRWFRGLLGLKKPEHASNDQKPPKEKRRWSFVKSYREGEQQQQQQQQRNSHVTLETEHVNNNNNNKQAIAVAAVTTRTAATAEASVAANFVRFNYSSNGIVRIREQWAAVKIQAAFRGSLARKALRALKGLVKLQALVRGHIERKRTAEWLKRMQSLLRAQARFNAARTLHTSHLNAKSSTLHLHGPATPEKSESPARSRSMKSEHSPVLKRNGSKSCLLNSGNISEHQLDEQSWNRVRSLIRTYSRSDEKSDRIVEIDSGKQHINAKRRNLFYSTSDTDYYYSQNLTPSKESKSHQSGQSVSCEVQSYYNPLKLNEVEESSFCTANNSPQFLSSATSKDDGYKRSPFTPTKSDGSRGYLRGYSDYPSYMAYTESSKAKVRSLSAPKQRPQFDKSGSSNRYSLNGHDMARLAAMRTSALQTSFTSKGYPGSGRLDKLGMPVGYRY* 450
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3967 449 Pfam IQ calmodulin-binding motif 136 150 IPR000048 GO:0005515
Mal5g3967 449 Pfam IQ calmodulin-binding motif 111 130 IPR000048 GO:0005515
Mal5g3967 449 MobiDBLite consensus disorder prediction 338 357 - -
Mal5g3967 449 ProSiteProfiles IQ motif profile. 133 160 IPR000048 GO:0005515
Mal5g3967 449 MobiDBLite consensus disorder prediction 37 56 - -
Mal5g3967 449 PANTHER IQ-DOMAIN 5-RELATED 1 444 - -
Mal5g3967 449 MobiDBLite consensus disorder prediction 12 31 - -
Mal5g3967 449 SMART iq_5 108 130 IPR000048 GO:0005515
Mal5g3967 449 SMART iq_5 131 152 IPR000048 GO:0005515
Mal5g3967 449 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 444 - -
Mal5g3967 449 MobiDBLite consensus disorder prediction 338 363 - -
Mal5g3967 449 Pfam Protein of unknown function (DUF4005) 333 416 IPR025064 -
Mal5g3967 449 MobiDBLite consensus disorder prediction 1 31 - -
Mal5g3967 449 MobiDBLite consensus disorder prediction 382 404 - -
Mal5g3967 449 MobiDBLite consensus disorder prediction 200 214 - -
Mal5g3967 449 MobiDBLite consensus disorder prediction 180 222 - -
Mal5g3967 449 Gene3D - 108 161 - -
Mal5g3967 449 ProSiteProfiles IQ motif profile. 109 137 IPR000048 GO:0005515
Mal5g3967 449 MobiDBLite consensus disorder prediction 39 56 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal5g3967 Mal-Chr5 109230574 109234151 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3967 110 449 IQD Protein Family AT4G23060 44.818 9.45e-66 217
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3967 - - gmx:100793587 507.294