Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3963 ATGTTGGCTGGTTGTTCTAGCTCGACATTGTTGTCACCAACTCACAGATTAAGGAGTGAAGCATCAGCAGCACAGTTTCAAGCTTGTCATTTTCAGCTACCATCAATGAGCACACAGAGATTGGACTTACCTTGTAGCTTCCCTCGGAAAGACGGTTCTTCGCGTTCGCAGCAGCCGTTGAGGCCGGTGGGGATTTCGGTGGAGAAGCCTGAAGCCAAGAACAACAGCAGCAGCACTTGTTCTCTGCAGCAGAACATTCGGTTACCGCCTTTAGCAACAACTGCTCAGACATTGGGAGAGATCAAGGATGAGGAGTTTTGGGAGAAGGGTGGGAGGAGTTTGAAGAGGCTTGCAGAACATGGATCTTTGGATGAGTCTTTTGCAAATAGAGTTAAGAGGAAAAAGGGTAATGGTGGTGATGAGAATTTTGATGAATTTGAAAGGGAGAGTTTCAGTTTGGCACAATTTGGAGCTGGAAACTTTTGGTCAGTTCATGGTTTTGGAGGGTTTAATAGCCCTTCACTTCCCTTCTCTCTGAATTGTTCTGGAGATGAGGAAAGAGTTTGTTTTGCTCCTGCTGAAGTGGTTTCTGGACCTTTGCCTTTGTCTAACAATCCTTGGCTTGAATCTGCTGTAACAAAGATCACCAATTTTGGTGAGGGTAGCCACCAACATCAGCATCATCATGTCAATGAAGGTTCTGTCTCTAATGGTTCATCAGAAAGCCAGAGTTTGAGCCTGAGGTTGAATGAGAATGCATCAGAACATGAAGAAGGTAATGGTTCAGGGAATCCTTATCAGCATGAAGGCACTGAAGTGGAGACAGGAGAAGAGGATGAAGAAGAGGAGCATCGCGGCTTTGAGCTTTTGAGCTTGCTTACTGGTTGTGTTGATGCTATTGGGTCAAGGAATGTGGCTGCAATCAACCATTTCATTGCAAAATTGGGTGATCTAGCATCTCCAAGGGGAACTTCAATAAGCCGAATTTGTGCTTATTTTACAGAAGCCTTAGCCATCAGAGTCACTAGGCTTTGGCCTCATGTTTTTCACATCAGCGCCACTTCTCGCGATTTTGACAGGGTGGTGGATGATGATGAAACTGTCACCGCATTGAGGCTTCTAAACCAGGTTACCCCAATTCCCAAGTTTCTTCATTTCACATCAAATGAGATGCTGTTGAGGGCTTTTGAAGGGAAAGAAAGGGTTCACATTATAGACTTTGACATTAAGCAAGGACTTCAATGGCCTAGTTTGTTCCAAAGTTTAGCTTCAAGGGGTAATCCTCCAAGCCATGTTCGAATCACGGGTGTGGGGGAATCGAAGCAAGAGCTGAATGAAACCGGAGACAGACTTGCTGGTTTTGCCGAGGCATTGAACCTTCCCTTTGATTTTCATCCAGTGGTGGACAGACTTGAAGATGTGAGGCTTTGGATGCTTCATGTGAAGGAACATGAAACTGTGGCTGTGAACTGTGTTTTACAGCTTCACAAAACACTTCATGATGGTAGCGGAGGAGCATTGAGAGACTTTTTAGGCCTCATTCGTAGCACCAATCCTACAATCGTTGTTATGGCAGAGCAAGAAGCGGAACACAATGACGCGAGGTTGGATTCAAGAGTTTGCAATTCATTGAAATATTACTCGGCGCTGTTTGATTCGATTGATCACAGTGGCCTTCCACTGGAGAGTCCGATGAGGATCAAGATAGAGGAGATGTTTGCTAGGGAGATAAGGAACATCGTTGCTTGCGAAGGAAGGGACAGGTTGGAGAGGCACCAGAGTTTTGGGAATTGGAGAAAGATGATAGTGGAGCATGGAGGGTTCAGATGCATGGGAGTCACTGATAGGGAAATGATTCAGAGCCAGTTTCTGTTGAAGATGTATTCTTGTGATAATTACAGTGTTCAGAAGCAGGAGCAGGAAGGAGCAACAGCACTTACTTTGGGTTGGCTTGATCAACCTCTCTACACAGTATCTTCTTGGACACCGGTCGACGTTGCTGGAAGCTCATCCTCTTTTTCTCAGCCAGCTTGA 2034 0.4548 MLAGCSSSTLLSPTHRLRSEASAAQFQACHFQLPSMSTQRLDLPCSFPRKDGSSRSQQPLRPVGISVEKPEAKNNSSSTCSLQQNIRLPPLATTAQTLGEIKDEEFWEKGGRSLKRLAEHGSLDESFANRVKRKKGNGGDENFDEFERESFSLAQFGAGNFWSVHGFGGFNSPSLPFSLNCSGDEERVCFAPAEVVSGPLPLSNNPWLESAVTKITNFGEGSHQHQHHHVNEGSVSNGSSESQSLSLRLNENASEHEEGNGSGNPYQHEGTEVETGEEDEEEEHRGFELLSLLTGCVDAIGSRNVAAINHFIAKLGDLASPRGTSISRICAYFTEALAIRVTRLWPHVFHISATSRDFDRVVDDDETVTALRLLNQVTPIPKFLHFTSNEMLLRAFEGKERVHIIDFDIKQGLQWPSLFQSLASRGNPPSHVRITGVGESKQELNETGDRLAGFAEALNLPFDFHPVVDRLEDVRLWMLHVKEHETVAVNCVLQLHKTLHDGSGGALRDFLGLIRSTNPTIVVMAEQEAEHNDARLDSRVCNSLKYYSALFDSIDHSGLPLESPMRIKIEEMFAREIRNIVACEGRDRLERHQSFGNWRKMIVEHGGFRCMGVTDREMIQSQFLLKMYSCDNYSVQKQEQEGATALTLGWLDQPLYTVSSWTPVDVAGSSSSFSQPA* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3963 677 MobiDBLite consensus disorder prediction 44 81 - -
Mal5g3963 677 Pfam GRAS domain family 290 662 IPR005202 -
Mal5g3963 677 PANTHER SCARECROW-LIKE PROTEIN 28 6 666 IPR030027 -
Mal5g3963 677 MobiDBLite consensus disorder prediction 231 269 - -
Mal5g3963 677 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 666 IPR005202 -
Mal5g3963 677 MobiDBLite consensus disorder prediction 220 284 - -
Mal5g3963 677 ProSiteProfiles GRAS family profile. 280 662 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3963 Mal-Chr5 109194048 109196081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3963 1 662 GRAS Transcription Factor Family AT1G63100 55.731 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal5g3963 GRAS 2.1e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3963 - - tcc:18606459 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3963 5 109194048 109196081 Mal5g3963 5 109194048 109196081 ECH