Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3957 ATGCCATTGTTGGTGGATCTAAAAAGAACTGTGCCCACCTCACCAAATTACTGGCTTAGGTACTTGCTGATATCCTTCATTCATATTCCCTCTATGCTTGTCAAACTTGCTGATGGTCAGGAAGATGAAACGATTGTTGATTTGGTAAACAAATACGGGCCTAAGAAGTGGTCCACTATCGCACAACATTTACCTGAACCTATTGGGAATTCTGATAACACTGGTTCTGGCATTGCTCGTCGATTAGGTAACTTTGCTACGCTGTTTGGTATTTTGAAAATTATTACAGTGTTGAAGACTGGTCTCAATATAATTATTGCTTGCAATATTCCAAAAAATAGTCCTACGCTGTCCTCACAAGATTCAAGGGATTGGTACGTGTTGGCTTTGTCCCTGGTGTCTTAG 405 0.4049 MPLLVDLKRTVPTSPNYWLRYLLISFIHIPSMLVKLADGQEDETIVDLVNKYGPKKWSTIAQHLPEPIGNSDNTGSGIARRLGNFATLFGILKIITVLKTGLNIIIACNIPKNSPTLSSQDSRDWYVLALSLVS* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3957 134 Pfam Myb-like DNA-binding domain 40 65 IPR001005 -
Mal5g3957 134 Gene3D - 39 84 - -
Mal5g3957 134 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 65 IPR017930 -
Mal5g3957 134 SUPERFAMILY Homeodomain-like 40 65 IPR009057 -
Mal5g3957 134 CDD SANT 40 65 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3957 Mal-Chr5 109125317 109126500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3957 40 69 MYB Transcription Factor Family AT4G32730 76.667 1.97e-10 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal5g3957 Myb_DNA-binding 3.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3957 K11878 - qsu:111986810 58.5362