Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3920 ATGGAGGCTAGTGACGGTGTTAGTGGTGGCGTTACGGTGGTCGGATCAGATGCTCCGTCGGAGTACCATGTAGCCCCGAGAACTGACAACCAAACTCCGACCAGTGGATCGGCGGTTCAGCTTTTAGCGGCGGTCCAAGCAGGTGCTCCGCCGCAACAACCGCCGTATATGGCGGTGATCACGACGGCTCCAGCAGCAACAACGGTGCCAGAGAAAAAGAAGAGAGGAAGGCCTAGAAAGTACGCACAGGATGGTTCGGTTACGACGGCGCTGTCTCCGAAGCCCATATCTTCTTCTGCTCCGTTGCCGCCGGTGATCGATTTCACGGCGGAGAAACGTGCAAAAGTGAAGCCGATTAGCTCTGTGAGCAAATCCAAATTTGAGTTGGAAAATATAGGTGAATGGGTCCCTTGCTCAGTTGGTTCAAATTTTACACCCCACATCATCACTGTTAATGCTGGAGAGGATGTTACTATGAAGGTAATTTCATTTTCTCAGCAAGGACCTCGAGCTGTATGCATTCTTTCAGCAAATGGTGTTATAAAAAGTGTCACACTTCGTCAGCCCGATTCTTCTGGGGGCACATTGACATATGAGGGATTGTTTGAAATTCTGTCTTTATCTGGTTCGTTCATGCCAAATGAAAGTGGAGGAGGAACACGAAGCAGATCAGGCGGCATGAGTGTGTCTTTAGCAAGCCCTGACGGACGTGTTGTTGGCGGAGGAGTAGCTGGTCTGTTGGTGGCTGCAAGTCCAGTGCAGGTAGTGGTTGGTAGTTTTATGGCAGGAAACCAACATGAGCAGAAGCCAAGAAATCAGAAACATGATGTGGTATCAACTGTGTCATCTCCTGCTGTTGTTCCCATCCCTACTCTTGATCCAATACCTATTCTATCATCAGTGACTTCCTTCCGTGCAGATAATTGGTCGGCCGTGCCAGCACCGGATGCAAAGGATAAGCCTGCTGCTGATATTAATGTGTCACTTCCGGGAGGCTAA 999 0.4975 MEASDGVSGGVTVVGSDAPSEYHVAPRTDNQTPTSGSAVQLLAAVQAGAPPQQPPYMAVITTAPAATTVPEKKKRGRPRKYAQDGSVTTALSPKPISSSAPLPPVIDFTAEKRAKVKPISSVSKSKFELENIGEWVPCSVGSNFTPHIITVNAGEDVTMKVISFSQQGPRAVCILSANGVIKSVTLRQPDSSGGTLTYEGLFEILSLSGSFMPNESGGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFMAGNQHEQKPRNQKHDVVSTVSSPAVVPIPTLDPIPILSSVTSFRADNWSAVPAPDAKDKPAADINVSLPGG* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3920 332 MobiDBLite consensus disorder prediction 67 96 - -
Mal5g3920 332 CDD DUF296 145 237 IPR005175 -
Mal5g3920 332 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 9 330 - -
Mal5g3920 332 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 330 IPR039605 GO:0003680
Mal5g3920 332 MobiDBLite consensus disorder prediction 1 36 - -
Mal5g3920 332 MobiDBLite consensus disorder prediction 311 332 - -
Mal5g3920 332 Pfam AT hook motif 72 83 IPR017956 GO:0003677
Mal5g3920 332 SUPERFAMILY AF0104/ALDC/Ptd012-like 142 264 - -
Mal5g3920 332 Pfam Plants and Prokaryotes Conserved (PCC) domain 146 260 IPR005175 -
Mal5g3920 332 ProSiteProfiles PPC domain profile profile. 141 287 IPR005175 -
Mal5g3920 332 Gene3D - 146 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3920 Mal-Chr5 108610884 108615292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3920 1 329 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 60.227 4.69e-122 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3920 - - gmx:100801730 464.536