Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3919 ATGGCAAAGGGTTGTTACAGCAACAACTATGAAGAGGCTAGAAAACAAAGACTTGAAGAAAACAAGAAGAGGTTTGAGGATTTAGGGATTTCAAAAATTTCAAAAAAGTTGACCGAAATCGCAATTCCTGCAAAGAAATCCCCGAGTCGTCTTCCCAAACCAAAATCTAAGACTAATGATGCAGCAGAACCTAGGCGTTCTTCTCGTTCAAGAAACCAAGTTACTTTATACAGTGAAGAGTTTAGAACAGACCTTCCTCATAAGAGATCATATCTGCGGAAGAGGTCAAGGTCATCATCATGGGAAAGTTATGTTGCGAGGCCACTAGATGAAATCAAAGAAGCTACAAAACAACAAAGAGCACGTGCTAAGGAGGCTGCAGAGGCACTCCAAATCAATTTGGAGTCTTCGAATCCATCATTTATCAAGTCAATGGTCCGGTCTCATGTTTATAGCTGTTTTTGGTTGGGTCTTCCTAGTAGGTTTTGTGAGGAACATCTTCCAAAAACAGTGCATAACATGATTTTAGAGGATGAAAATGGCTCAGAGTACGATGCTGTTTACATTGGCAGTAGAAGTGCGCTGAGTGGTGGCTGGAGAGGATTTGCATTGGAACATAAATTGGATGATGGTGATGCACTTGTTTTTGAATTGGTTGAAGCAGCAAGATTTAAGATTTATATAGTTAGAGCATTTCCAAATATAGATGAGAATATGCACGCATCCAAAGCAACAAAAGAATTCAAAGCCACAAGTAATCGTGAATCAGGATCAAAGAAGACTAAAAAGCAAAAACAAGTCATTGTATGTGAAACTAAGGAATCAGAGAGTTCTGAAGAAAGTCTGCCAGAAAGTAACATTGACAAAGAATTCAAACCACATAGGGTAAATCCGAGTAGAAAAACTAAATCTTCTCAGAAAAAAATGCAGAAGATATCTGAAGTACCTACTACTCCTGAGCCCAAAAGGGAAACACAAATTGAAATTGTGGAACTAAAGGAAGCTTTAAAGAATACTAGATCTTCTCAAAGAAAAATGCAAAAGATATCTGAAGTACCTACTACTCCTGAGCCCAAAAGGGAAGCACAAATTGAAATTGTGGAACCAAAGGAAGCTATAAGGAGTACTAGATCTTCTCAAAGAAAAATGCAAAAGATATCTGAAGTATCTACTACTCTTGAGCCAAAAGGGGAAACACATGTCGAAATTGTGAAACCAAAGGCAGCTACAAAGTTGTCAAACAAGACAAGAAGTCAAAAGGTAACGATGAATGTGAAATTGATGACTCAACTAATACTCAAGAAAAATGAACATGTTCGTGATAATGATATTGAGTTAATGAAAGTTAAGCCAGATGAAGAGGCAAGCAAACACGCTTCACAAATACCTCGTAAGAAATCAGCTCGTAAGTTTTTCAGAAAGAGAGCATAA 1431 0.3767 MAKGCYSNNYEEARKQRLEENKKRFEDLGISKISKKLTEIAIPAKKSPSRLPKPKSKTNDAAEPRRSSRSRNQVTLYSEEFRTDLPHKRSYLRKRSRSSSWESYVARPLDEIKEATKQQRARAKEAAEALQINLESSNPSFIKSMVRSHVYSCFWLGLPSRFCEEHLPKTVHNMILEDENGSEYDAVYIGSRSALSGGWRGFALEHKLDDGDALVFELVEAARFKIYIVRAFPNIDENMHASKATKEFKATSNRESGSKKTKKQKQVIVCETKESESSEESLPESNIDKEFKPHRVNPSRKTKSSQKKMQKISEVPTTPEPKRETQIEIVELKEALKNTRSSQRKMQKISEVPTTPEPKREAQIEIVEPKEAIRSTRSSQRKMQKISEVSTTLEPKGETHVEIVKPKAATKLSNKTRSQKVTMNVKLMTQLILKKNEHVRDNDIELMKVKPDEEASKHASQIPRKKSARKFFRKRA* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3919 476 MobiDBLite consensus disorder prediction 450 476 - -
Mal5g3919 476 SUPERFAMILY DNA-binding pseudobarrel domain 136 230 IPR015300 -
Mal5g3919 476 SMART B3_2 141 232 IPR003340 GO:0003677
Mal5g3919 476 MobiDBLite consensus disorder prediction 379 393 - -
Mal5g3919 476 MobiDBLite consensus disorder prediction 246 297 - -
Mal5g3919 476 MobiDBLite consensus disorder prediction 462 476 - -
Mal5g3919 476 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS05G0481400 5 246 - -
Mal5g3919 476 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 5 246 IPR044837 -
Mal5g3919 476 Coils Coil 109 133 - -
Mal5g3919 476 Coils Coil 8 28 - -
Mal5g3919 476 Pfam B3 DNA binding domain 141 229 IPR003340 GO:0003677
Mal5g3919 476 Coils Coil 322 342 - -
Mal5g3919 476 MobiDBLite consensus disorder prediction 246 323 - -
Mal5g3919 476 MobiDBLite consensus disorder prediction 361 378 - -
Mal5g3919 476 ProSiteProfiles B3 DNA-binding domain profile. 141 232 IPR003340 GO:0003677
Mal5g3919 476 MobiDBLite consensus disorder prediction 338 393 - -
Mal5g3919 476 Gene3D - 115 232 IPR015300 -
Mal5g3919 476 CDD B3_DNA 139 230 IPR003340 GO:0003677
Mal5g3919 476 MobiDBLite consensus disorder prediction 41 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3919 Mal-Chr5 108597203 108602571 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3919 10 252 B3 DNA Binding Superfamily AT5G58280 48.519 2.62e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal5g3919 B3 1.1e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3919 - - cam:101498339 559.681