Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3905 ATGGCTGCAGAATCATTTCAAGTGGCCACTTCTTCACTCTGTAGTCTCAATGGCTCTCACCGAAAACCAACCCTTGTTTCTCCGCTTCGCTTCATGGGTTCGGCTTTTCGCCCAGGACAATCTCGTTCTTTCGCTTCCTCTTCATTATCACAATTCTTTGGAACTACTCGAATTCACTCCACTTCACCCCAACTTGCTCGAACAAGAAGAAATTTCTCAGTTTTCGCCATGTCCACTCCCGAAGAGGCGAAGCGTGCTGTCCCATTGAAGGATTATCGCAACATTGGCATTATGGCTCACATAGACGCTGGAAAGACAACTACAACTGAAAGAATTCTCTTCTATACTGGAAGAAACTATAAAATTGGAGAGGTGCACGAGGGAACAGCAACAATGGACTGGATGGAACAAGAACAAGAAAGAGGGATTACCATTACTTCTGCTGCAACCACCACATTTTGGGATAAGCACAGGATCAACATCATTGATACTCCTGGTCATGTTGACTTCACCTTAGAAGTGGAGCGTGCTCTTAGGGTGTTGGATGGAGCTATATGCTTGTTTGACAGTGTTGCTGGTGTGGAGCCACAATCAGAAACCGTGTGGAGGCAAGCTGACAGATATGGAGTCCCGCGAATTTGTTTTGTCAATAAAATGGACCGCCTTGGAGCAAATTTTTTCCGAACAAGAGACATGATAGTGACAAATTTAGGTGCTAAGCCACTTGTACTTCAGCTCCCAATTGGTGCAGAAGATTCCTTCAAGGGAGTTATTGATCTTGTTAGGATGAAAGCTATAGTTTGGGGTGGAGAAGAGCTTGGTGCCAAGTTTTCTTATGAAGATATACCTGCAGATCTCCTCGAGCAGGCTCAAGATTACAGGTCACAGCTGATAGAAACCATAGTTGAGTTAGATGATGAGGCTATGGAGAACTACCTGGAAGGAGTTGAACCAGATGAAGGAACTATAAAAAAATTAATTAGGAAGGGATCCATAGCAGCCACTTTTGTGCCAGTGTTGTGTGGATCAGCTTTCAAAAACAAGGGAGTCCAACCGTTGTTAGATGCCGTAGTGGATTATCTACCATCACCACTTGACGTACCACCAATGAAGGGCACCGACCCTGAAAACCCAGAAGCAACAATAGAGAGGATAGCTAGTGATGATGAACCATTTTCTGGACTAGCTTTTAAGATCATGAGTGATTCATTTGTAGGGTCCCTTACATTTGTCAGGGTGTATTCTGGAAAGCTAACTGCAGGGTCTTATGTACTCAATTCAAACAAAGGCAAAAAGGAGAGAATTGGTAGACTTCTAGAAATGCATGCAAACAGCAGAGAAGACGTTAAAGTCGCTTTAACAGGGGATATTGTTGCTCTTGCTGGTTTGAAAGATACAATAACAGGTGAAACATTGTGTGACCCCGAGGATCCAGTCGTGCTTGAGCGGATGGACTTCCCTGATCCTGTTATTAAGATTGCAATTGAACCCAAAACTAAAGCTGACATTGACAAGATGGCAGCTGGTTTAGTCAAGCTTGCACAGGAAGACCCTTCTTTCCACTTCTCCCGTGATGAAGAGATAAACCAGACAGTGATTGAAGGAATGGGAGAGTTGCATCTTGAAATCATTGTTGACCGTCTCAAAAGAGAATTTAAGGTAGAAGCTAATGTTGGTGCTCCCCAAGTAAACTACAGGGAAAGCATTTCCAAAATCACGGAAACGAGGTATGTGCACAAGAAACAATCAGGTGGACAAGGTCAGTTTGCAGATATAACCATACGGTTTGAACCCATGGAGCCAGGTAGTGGATATGAATTCAAGAGTGAAATCAAAGGAGGAGCAGTTCCAAAAGAATACATTCCTGGGGTGGTTAAAGGATTGGAAGAGTGTATGAGCAATGGTGTTCTGGCTGGATTTCCAGTTGTTGATGTACGTGCAGTACTTGTGGATGGTACTTACCATGATGTGGATTCAAGTCTGTTGGCTTTCCAGTTGGCAGCAAGAGGAGCTTTTCGTGAAGGAATAAGAAAAGCCGGACCAAAAATGCTTGAACCTATAATGAAAGTTGAAGTTGTTACTCCTGAAGAACATTTAGGAGATGTAATTGGTGATCTCAACTCAAGAAGAGGCCAAATCAACAGTTTTGGTGACAAACCAGGTGGACTCAAGGTGGTTGATTCATTAGTACCTCTTGCTGAGATGTTTCAGTATGTCAGTACACTCCGAGGGATGACGAAGGGTCGAGCATCCTACTCAATGCAATTAGCCATGTTTGATGTGGTACCTCAACACATTCAGAATCAACTTGCCACAAAAGTGCAAGAAGTTGCTGCTTAA 2340 0.4346 MAAESFQVATSSLCSLNGSHRKPTLVSPLRFMGSAFRPGQSRSFASSSLSQFFGTTRIHSTSPQLARTRRNFSVFAMSTPEEAKRAVPLKDYRNIGIMAHIDAGKTTTTERILFYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADRYGVPRICFVNKMDRLGANFFRTRDMIVTNLGAKPLVLQLPIGAEDSFKGVIDLVRMKAIVWGGEELGAKFSYEDIPADLLEQAQDYRSQLIETIVELDDEAMENYLEGVEPDEGTIKKLIRKGSIAATFVPVLCGSAFKNKGVQPLLDAVVDYLPSPLDVPPMKGTDPENPEATIERIASDDEPFSGLAFKIMSDSFVGSLTFVRVYSGKLTAGSYVLNSNKGKKERIGRLLEMHANSREDVKVALTGDIVALAGLKDTITGETLCDPEDPVVLERMDFPDPVIKIAIEPKTKADIDKMAAGLVKLAQEDPSFHFSRDEEINQTVIEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKITETRYVHKKQSGGQGQFADITIRFEPMEPGSGYEFKSEIKGGAVPKEYIPGVVKGLEECMSNGVLAGFPVVDVRAVLVDGTYHDVDSSLLAFQLAARGAFREGIRKAGPKMLEPIMKVEVVTPEEHLGDVIGDLNSRRGQINSFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYSMQLAMFDVVPQHIQNQLATKVQEVAA* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3905 779 Pfam Elongation factor G C-terminus 683 769 IPR000640 -
Mal5g3905 779 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 363 IPR027417 -
Mal5g3905 779 Gene3D Translation factors 375 489 - -
Mal5g3905 779 CDD EFG_mtEFG1_IV 565 680 IPR005517 GO:0005525
Mal5g3905 779 CDD EFG_III 487 562 IPR009022 -
Mal5g3905 779 SMART EFG_IV_2 562 680 IPR005517 GO:0005525
Mal5g3905 779 Coils Coil 287 307 - -
Mal5g3905 779 Pfam Elongation factor Tu GTP binding domain 91 363 IPR000795 GO:0003924|GO:0005525
Mal5g3905 779 Hamap Elongation factor G, chloroplastic. 82 779 IPR030848 GO:0003746|GO:0006414|GO:0009507
Mal5g3905 779 Gene3D Elongation Factor G (Translational Gtpase), domain 3 490 566 - -
Mal5g3905 779 SUPERFAMILY Ribosomal protein S5 domain 2-like 561 681 IPR020568 -
Mal5g3905 779 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 90 365 IPR000795 GO:0003924|GO:0005525
Mal5g3905 779 PANTHER RIBOSOME-RELEASING FACTOR 2, MITOCHONDRIAL 70 772 - -
Mal5g3905 779 TIGRFAM EF-G: translation elongation factor G 85 773 IPR004540 GO:0003746|GO:0005525|GO:0006414
Mal5g3905 779 Pfam Elongation factor Tu domain 2 406 473 IPR004161 GO:0005525
Mal5g3905 779 SUPERFAMILY EF-G C-terminal domain-like 685 774 IPR035647 -
Mal5g3905 779 SMART EFG_C_a 682 770 IPR000640 -
Mal5g3905 779 PANTHER TRANSLATION ELONGATION FACTOR G-RELATED 70 772 - -
Mal5g3905 779 CDD EFG_mtEFG_C 685 763 IPR035649 -
Mal5g3905 779 Gene3D - 567 770 IPR014721 -
Mal5g3905 779 SUPERFAMILY Translation proteins 346 486 IPR009000 -
Mal5g3905 779 Gene3D - 686 757 - -
Mal5g3905 779 Pfam Elongation Factor G, domain III 486 559 IPR041095 -
Mal5g3905 779 PRINTS GTP-binding elongation factor signature 160 170 IPR000795 GO:0003924|GO:0005525
Mal5g3905 779 PRINTS GTP-binding elongation factor signature 140 148 IPR000795 GO:0003924|GO:0005525
Mal5g3905 779 PRINTS GTP-binding elongation factor signature 176 187 IPR000795 GO:0003924|GO:0005525
Mal5g3905 779 PRINTS GTP-binding elongation factor signature 212 221 IPR000795 GO:0003924|GO:0005525
Mal5g3905 779 PRINTS GTP-binding elongation factor signature 94 107 IPR000795 GO:0003924|GO:0005525
Mal5g3905 779 CDD EFG_mtEFG_II 392 474 - -
Mal5g3905 779 CDD EF-G 94 364 - -
Mal5g3905 779 TIGRFAM small_GTP: small GTP-binding protein domain 92 262 IPR005225 GO:0005525
Mal5g3905 779 SUPERFAMILY EF-G C-terminal domain-like 486 563 IPR035647 -
Mal5g3905 779 Pfam Elongation factor G, domain IV 561 679 IPR005517 GO:0005525
Mal5g3905 779 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 133 148 IPR031157 -
Mal5g3905 779 Gene3D - 83 374 IPR027417 -
Mal5g3905 779 Hamap Elongation factor G [fusA]. 88 774 IPR004540 GO:0003746|GO:0005525|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3905 Mal-Chr5 108409582 108413341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3905 79 750 Eukaryotic Initiation Factors Gene Family AT1G56070 25.153 1.06e-41 162