Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3863 ATGAGTTCAAGTTCCTCACAGCGCATGTTCCAGCTCAAGCTCGATCCTTTAACCGGTAACTCCGAATGGGTCATCATCGACGAAGAAGGCGACAACGAACAAACCTTCCAGTTCCACCAACCTCTTCTCGCTACAACATCATATTTAGACATGCTCAACGATTCCACCAGAAACACTGCATATCGCGAAGCCATTGAAAAAACCATCACAAAACCATGCCATGTTCTCGATATCGGTGCTGGAACTGGGTTACTTTCGATGATGGCTTTACGAGCTATGGGTGGGAAAGGAACGGTGACGGCGTGTGAGTCTTATCTTCCGATGGTGAAGTTGATGAAGAAAGTTATGCGGATTAATGGGATGGAAGGAAAAATTAAAGTTATTAATAAGCGTTCTGATGAAGTTGAAGTTGGTGTTGATTTATCTTCACGTGCTGATGTTCTTGTGAGCGAGATATTAGATTCAGAGTTACTCGGTGAGGGACTTATACCAACCCTACAACATGCTCATGACAATTTGTTGGTGGAAAATCCTCTGACTGTACCATATCGAGCAACCACATATGGACAGCTAGTTGAAAGCACATTCTTATGGCGATTGCATGATTTGCATAGCAATGAGGCTGGTACATCTGATGGCATTCGCCTTGCACCTCTTGGACTTGAAAGTGTTTTAAGTGTTAAACGTCAGCAATATGCCATGCATTGTGATCCAATAGGAGAAGAACTGAAACCGCTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGAGAGTTATGGCAAAACTGAGCTGTGCATAAAGGCAACATGCGATGGCAGAGTTCATGCTGTTGTCTCTTGGTGGGTACTTCAACTTGATCGTGAAGGGACAATTTATTATTCCACTGCTCCTAGGTGGATAAGATCACCAACAACTACAGGTCCTGTTGATTGGTGTGACCACTGGAAACAGTGTGTTTGGTTTGTTCCAAGAAGTGGTATATCCATATTCAAAGGGGAAGAGATTCATTTACATGCTACTCATAATGATACCAGTATCTCGTATAATCTAGATACCCAAGTGTCAACAACTGAGGATTTACATTGTGGCTTAACAACTGGAGATTTTCAGCTTGTACTTCCACCAGAAAGGGCTGCAATCTATGGAGACAAAGGATGGAGGTTTTCGATGTTGAAAGCAGTAGAAAGTGTGTTGCAGGGAAGACGTCACTCCTTATGCTTGGTTGCAGATGATAGTGTGTTTTTACCTCTTCTTGTGGCAAAGCTTTCAGAAGCATCACATGTAATATCATCTTTTCCGAGGCTGAAGGAAAATGGTCTCCAATATTTGCAAGCTGCTGCCCGTGCAAATAATATTTCACCTAATTGCATAGAAGTTGTTGAAAAAGGGGTGAAAAAGTTAACCATGCATGATACAAACCAGAAAAAGGTTGACCTCTTAATAGCGGAACCTTTCTATTTTGGACATGATGGCATGCTTCCATGGCAGAACCTGCGGTTTTGGAAGGATCGTACAACACTCGATTGTATCCTTTCGGAAGATGCTATAATAATTCCCAGTAAAGGAATTTTGAGGGCTTGTGCCATCTATCTTCCTGATCTTTGGAAAAGTCGTTGCTGCTTGAATAAGATAGAAGGTTTTGACCATTCTGGTGTAAACACTACATTGGGAGCTTGCGGTCATCTACCTGAATCGGAAGAGGGTCCTTGTCTGCCTTTTTTCCTTTGGCAGTGTGGAGAATTTGATGTGCTTAGTGAGACATTTGATGTGATGGAGTTTGATTTCACAAAACAAATCTGTGAATGTCAAGGAAAATCCCAGGTTAAATTCACCAAGACTGGAGTATGTCATGGGTTTGTGCTGTGGATTGACTGGGTGATGGATTTGCAAAATTCTGTTGCTATATCAACTGGTCCAGATAAAAGATATTGGAAGCAGGGAATAAAGCTTCTTGCAACACCAAGAACCGTAGGGCCCCAAGGATCAACAAATGTCCAAGGATGTTGTTCTGCAGCTCTTGAAGCATTTTTTAATCCATCAAATGGGGAACTCAAACTTATACTTGATTTCTCATGA 2091 0.4185 MSSSSSQRMFQLKLDPLTGNSEWVIIDEEGDNEQTFQFHQPLLATTSYLDMLNDSTRNTAYREAIEKTITKPCHVLDIGAGTGLLSMMALRAMGGKGTVTACESYLPMVKLMKKVMRINGMEGKIKVINKRSDEVEVGVDLSSRADVLVSEILDSELLGEGLIPTLQHAHDNLLVENPLTVPYRATTYGQLVESTFLWRLHDLHSNEAGTSDGIRLAPLGLESVLSVKRQQYAMHCDPIGEELKPLSEPFKIFEFDFWKRPESYGKTELCIKATCDGRVHAVVSWWVLQLDREGTIYYSTAPRWIRSPTTTGPVDWCDHWKQCVWFVPRSGISIFKGEEIHLHATHNDTSISYNLDTQVSTTEDLHCGLTTGDFQLVLPPERAAIYGDKGWRFSMLKAVESVLQGRRHSLCLVADDSVFLPLLVAKLSEASHVISSFPRLKENGLQYLQAAARANNISPNCIEVVEKGVKKLTMHDTNQKKVDLLIAEPFYFGHDGMLPWQNLRFWKDRTTLDCILSEDAIIIPSKGILRACAIYLPDLWKSRCCLNKIEGFDHSGVNTTLGACGHLPESEEGPCLPFFLWQCGEFDVLSETFDVMEFDFTKQICECQGKSQVKFTKTGVCHGFVLWIDWVMDLQNSVAISTGPDKRYWKQGIKLLATPRTVGPQGSTNVQGCCSAALEAFFNPSNGELKLILDFS* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3863 696 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 9 636 IPR025799 GO:0016274|GO:0018216
Mal5g3863 696 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 7 9 636 - -
Mal5g3863 696 Gene3D - 528 695 - -
Mal5g3863 696 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 445 666 IPR029063 -
Mal5g3863 696 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 48 352 IPR029063 -
Mal5g3863 696 Gene3D - 184 368 - -
Mal5g3863 696 Pfam Ribosomal protein L11 methyltransferase (PrmA) 63 155 - -
Mal5g3863 696 PIRSF Arg_N-mtase 7 695 IPR014644 GO:0006479|GO:0008168
Mal5g3863 696 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 357 696 IPR025799 GO:0016274|GO:0018216
Mal5g3863 696 Gene3D Vaccinia Virus protein VP39 41 183 IPR029063 -
Mal5g3863 696 Gene3D Vaccinia Virus protein VP39 375 524 IPR029063 -
Mal5g3863 696 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 32 356 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3863 Mal-Chr5 107641773 107651233 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3863 48 188 C2H2 Transcription Factor Family AT3G12270 30.667 3.81e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3863 K11438 - gmx:100785846 1196.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3863 5 107641773 107651233 Mal5g3863 5 107641773 107651233 ECH