Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3847 ATGGCACCCAAAAAAGATGGACCAACTAAGAAAACAATGAACAGAGGAGCATGGACCTTGGAGGAAGATCAAAAGCTAGCTCATTGCATTCAAATTCATGGTGCCAAGAAATGGAAAACTGTTGCAAACAATTCAGGTTTGAATAGGTGTGGAAAGAGTTGCAGGCTAAGATGGTTGAACTATCTTAGACCTAATATCAAAAGAGGGAACATTTCAGATGAAGAAGATGATTTGATTATTAGGCTTCACAAACTTCTTGGAAACAGGTGGTCTTTGATAGCTGGAAGGCTTCCGGGGCGAACAGACAACGAAATTAAGAACTACTGGAATTCTCATTTGTGCAAAAAAGCCAGTCACGTAGAGGAAAAACCGGAAACTTCCACTACACAAGAAACTATAGCCCAGAACAATATTGTTGGGGATAATGTTATGTTAGAGAATAAAGATTCAATTAACTTTTCCACTGATGAACTATATGAGTTTGATTGGGTGAATAACTTCTTGGAATTTGATCAGATTCAGTTTCCTGAAAACACACAAACATCTGAGTGA 552 0.3804 MAPKKDGPTKKTMNRGAWTLEEDQKLAHCIQIHGAKKWKTVANNSGLNRCGKSCRLRWLNYLRPNIKRGNISDEEDDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKASHVEEKPETSTTQETIAQNNIVGDNVMLENKDSINFSTDELYEFDWVNNFLEFDQIQFPENTQTSE* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3847 183 PANTHER TRANSCRIPTION FACTOR MYB114-LIKE 3 172 - -
Mal5g3847 183 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mal5g3847 183 Gene3D - 8 68 - -
Mal5g3847 183 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 3 172 - -
Mal5g3847 183 CDD SANT 72 113 IPR001005 -
Mal5g3847 183 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Mal5g3847 183 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Mal5g3847 183 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Mal5g3847 183 Gene3D - 72 139 - -
Mal5g3847 183 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Mal5g3847 183 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mal5g3847 183 CDD SANT 17 62 IPR001005 -
Mal5g3847 183 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Mal5g3847 183 SMART sant 14 64 IPR001005 -
Mal5g3847 183 SMART sant 67 115 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3847 Mal-Chr5 107430402 107431285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3847 9 138 MYB Transcription Factor Family AT3G13540 58.462 6.85e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal5g3847 Myb_DNA-binding 4.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3847 K09422 - gmx:100799575 255.373