Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3831 ATGGCTAACTATGAAGAAGTTTCAGCTCTAAAACGCATTAAATTACATCTTCTTGGTGAATTTTCTCCACTTCCATCTCCAATTTCAACACCATGTTTTGATTTTGATTTTGATTTTGAATTTCAAACAAACCAAACATCATCTCAATTCGAATTTCAAACAAATCAAACCACTTCTCAATCTGAATCCAACTCTTCCACTTCTAATTCTTCAATTTCTTTGGATCAATATTTCACCAACCTCCTTGAAACAGATGCACAAATTCCTCTCTTTGAATTTGACACGAAACCACAATCAATGGAACATGAGAGCCCCAAAGCTCTAACATCTCATCCTGTTAACCAACCTCAACGAACTGTAGAGAAAAAGCCTAAACTGAGCCGAAAACCGTCGCTGGAAATTGCTCTACCGAAGAAAACCGAGTGGATTCAATTCGGAAGCTCCGATCCGAAGCCGGAGGTTGTTGCACAGAAGCCGGAAGTGGTTGAGAAACAGCACTACAGAGGAGTTAGACAAAGACCATGGGGAAAGTTTGCAGCTGAGATCCGTGACCCGAACAAACGCGGATCAAGAGTTTGGCTCGGAACTTTTGAAACGGCTATCGAAGCTGCTAAAGCCTACGATTCAGCCGCTTTCAGGCTGCGTGGATCTAAAGCGATTCTCAACTTTCCGCTTGAAGTCAACGCGGCGGCGGTGGCGGAGACCTCCGGCGACAAGAAACGTTGCCGTGAGGAGGAAGAGGAAGAGGTGGTAGAAGTAAAACCGGTGGTGAAAAAGGAGAAAATAACGGAATATGATATGAACTGTTTTAAAGAGATGCCGTTAACGCCGTCATTTTGGACTGGCTTGTGGGACGGTGATGTTAAGGGCACGTTCAGCGTTCCTTCGTCGCCGTTAACTTCCTTTTGTTTGTCACCTTTAGTTGCTGTGTGA 933 0.4405 MANYEEVSALKRIKLHLLGEFSPLPSPISTPCFDFDFDFEFQTNQTSSQFEFQTNQTTSQSESNSSTSNSSISLDQYFTNLLETDAQIPLFEFDTKPQSMEHESPKALTSHPVNQPQRTVEKKPKLSRKPSLEIALPKKTEWIQFGSSDPKPEVVAQKPEVVEKQHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFETAIEAAKAYDSAAFRLRGSKAILNFPLEVNAAAVAETSGDKKRCREEEEEEVVEVKPVVKKEKITEYDMNCFKEMPLTPSFWTGLWDGDVKGTFSVPSSPLTSFCLSPLVAV* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3831 310 ProSiteProfiles AP2/ERF domain profile. 166 224 IPR001471 GO:0003700|GO:0006355
Mal5g3831 310 SMART rav1_2 166 230 IPR001471 GO:0003700|GO:0006355
Mal5g3831 310 Pfam AP2 domain 166 216 IPR001471 GO:0003700|GO:0006355
Mal5g3831 310 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 5 297 - -
Mal5g3831 310 MobiDBLite consensus disorder prediction 102 117 - -
Mal5g3831 310 PRINTS Ethylene responsive element binding protein signature 206 226 IPR001471 GO:0003700|GO:0006355
Mal5g3831 310 PRINTS Ethylene responsive element binding protein signature 167 178 IPR001471 GO:0003700|GO:0006355
Mal5g3831 310 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 5 297 - -
Mal5g3831 310 Gene3D AP2/ERF domain 165 227 IPR036955 GO:0003700|GO:0006355
Mal5g3831 310 MobiDBLite consensus disorder prediction 49 70 - -
Mal5g3831 310 MobiDBLite consensus disorder prediction 98 128 - -
Mal5g3831 310 CDD AP2 165 224 IPR001471 GO:0003700|GO:0006355
Mal5g3831 310 SUPERFAMILY DNA-binding domain 166 226 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3831 Mal-Chr5 107086058 107086990 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3831 1 310 AP2-EREBP Transcription Factor Family AT5G47230 43.925 4.86e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal5g3831 AP2 5.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3831 K09286 - gmx:100800453 325.094