Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3815 ATGAACATGGAAATCACTTACCAACTTGGCCTTGTTTGTATCATACTGCTCTTACCTCAGCTCTGTACCTCACAAGACTCTTTTACGGACTCCAGAGCAACATACTACGGTAGCCCAGATTGTTATGGGACTCCAAGGGGAGCTTGTGGCTTTGGAGAATATGGAAGGACAGTGAATGATGGCAGTGTCGCAGGTGTGTCTAAGCTATGGAACAATGGCAGTGGCTGTGGTGCATGCTATCAGGTGAGGTGTAAAATACCACAATATTGCGATGAAAATGGAGCAACCGTGGTGGTAACAGACTACGGTGAAGGAGACAGAACAGACTTCATAATGAATCCACGTGGATACTCAAAATTGGGACTCAATGCAGATGCATCTGCAGAGCTCTTCAAATATGGTGTAGTAGATATTGAATACAAAAGAGTCCCATGTATGTACAGTGGCTATAACATAATGGTTCAAGTCCATGAACGCAGCAAAAACCCTGATTACTTTGCTGTTGTGGTTCTCTATGTAGATGGAATGTATGATGTTAATGCTGTTGAAATGTGGGAGGAAGATTGCCAAGAATGGATACCAATGAGGAGGGTCTATGGAGTAGTGTTTGACTCTGCCGATCCTCCAAGTGGTGAAATAAACTTGAGGTTCCAAGTGAGTGGAAGTAATGGTGTTTATTGGGTGCAGTCCAAGAATGCTATCCCTAGTGATTGGAAGGCTGGAGCTGCATATGACACTATGGTTCAGCTTAATTAG 756 0.4365 MNMEITYQLGLVCIILLLPQLCTSQDSFTDSRATYYGSPDCYGTPRGACGFGEYGRTVNDGSVAGVSKLWNNGSGCGACYQVRCKIPQYCDENGATVVVTDYGEGDRTDFIMNPRGYSKLGLNADASAELFKYGVVDIEYKRVPCMYSGYNIMVQVHERSKNPDYFAVVVLYVDGMYDVNAVEMWEEDCQEWIPMRRVYGVVFDSADPPSGEINLRFQVSGSNGVYWVQSKNAIPSDWKAGAAYDTMVQLN* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3815 251 SMART dpbb_1 62 140 IPR007112 -
Mal5g3815 251 PANTHER EXPANSIN-B1-LIKE PROTEIN 6 251 - -
Mal5g3815 251 Gene3D - 145 247 IPR036749 -
Mal5g3815 251 Pfam Lytic transglycolase 63 140 IPR009009 -
Mal5g3815 251 SUPERFAMILY Barwin-like endoglucanases 14 149 IPR036908 -
Mal5g3815 251 Pfam Expansin C-terminal domain 152 235 IPR007117 -
Mal5g3815 251 Gene3D - 19 144 IPR036908 -
Mal5g3815 251 PANTHER EXPANSIN-B3 6 251 - -
Mal5g3815 251 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Mal5g3815 251 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Mal5g3815 251 PRINTS Expansin/Lol pI family signature 192 206 IPR007118 GO:0005576
Mal5g3815 251 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Mal5g3815 251 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Mal5g3815 251 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
Mal5g3815 251 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 246 IPR007117 -
Mal5g3815 251 SUPERFAMILY PHL pollen allergen 151 245 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3815 Mal-Chr5 106776425 106778563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3815 1 250 Expansin Gene Family AT4G17030 55.777 1.05e-105 304