Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3795 ATGAAGTGTTTCTTCTTCAAAGACAAGTCTAAATCAGCTCCAGAATTGCAGAACCAAAGCAACAAGAACAAGAACAAGAATCCGGCGTCGAAACGCGCAGCAAACTCTACTGGCTCTATATCTTCTCCCAGGAGTGTGAAGGATTTGTACAGAGAGAAAGAGCAAAGTTTCAGAGTTTTTACTCTTCAAGAACTAAGAGAAGCTACCAATGGTTTCAATAGGATGCTCAAGATTGGAGAAGGGGGTTTTGGAAGTGTTTATAAAGGATCCATTTTGCCTTCAAATGGACAAGGTGAACCAGTTATAGTTGCCATCAAAAGGCTTAACACTCGTGGATTTCAGGGTCATAAAGAATGGCTTGCAGAAGTTCAATTTCTCAGCATTGTTAATCACCCAAATTTGGTTAAGCTTTTGGGATATTGCTCCGTAGATGGAGAAAGAGGAATCCAAAGGTTGTTGGTGTATGAGTTCATGCCAAACAGGAGCTTGGAAAATCACCTTTTCAGTAAAACTTTACCAACCCTTCCGTGGAAAACAAGATTGGAGATCATGCTTGGTGCTGCTGAAGGATTAGCTTATCTACACGAGGGATTGGAGATACAGGTGATTTACCGGGATTTCAAATCATCGAACGTTCTATTGGATGAGGATTTCCACCCAAAGCTCTCAGATTTTGGTCTTGCAAGGGAAGGGCCACAAGGGGATCAAACTCATGTATCAACTGCGGTAGTTGGGACACAAGGATATGCTGCACCGGAGTATATCGAAACAGGTCATCTCAAAGTCCAGAGTGACATGTGGAGTTTCGGTGTCGTACTCTATGAGATCCTCACAGGAAGAAGAACATTGGAAAGGAACCGTCCGACAGCTGAACAGAAGCTATTAGATTGGGTTAAACAATATCCCACTGACTCTAATAGATTCAACATGATAATGGATCCGCGTCTTAGGAACCAATATCCAATGGTTGCAGCGCGTAAAATAGCGAAGTTGGCCGATAGTTGCTTGAAGAAGAATCCAGAAGATAGGCCATCTATGAGTCAGATAGTGGAAGGGTTGAAACAAGCATTACAATATTCAGAAATGTCAAACACTTCTCATGATAATGCTGAATCATCCCGGTCAAGATTGGTTCAAAAAGGTAAATAG 1149 0.4195 MKCFFFKDKSKSAPELQNQSNKNKNKNPASKRAANSTGSISSPRSVKDLYREKEQSFRVFTLQELREATNGFNRMLKIGEGGFGSVYKGSILPSNGQGEPVIVAIKRLNTRGFQGHKEWLAEVQFLSIVNHPNLVKLLGYCSVDGERGIQRLLVYEFMPNRSLENHLFSKTLPTLPWKTRLEIMLGAAEGLAYLHEGLEIQVIYRDFKSSNVLLDEDFHPKLSDFGLAREGPQGDQTHVSTAVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEILTGRRTLERNRPTAEQKLLDWVKQYPTDSNRFNMIMDPRLRNQYPMVAARKIAKLADSCLKKNPEDRPSMSQIVEGLKQALQYSEMSNTSHDNAESSRSRLVQKGK* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3795 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Mal5g3795 382 ProSiteProfiles Protein kinase domain profile. 72 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3795 382 Gene3D Transferase(Phosphotransferase) domain 1 158 380 - -
Mal5g3795 382 Pfam Protein tyrosine and serine/threonine kinase 77 352 IPR001245 GO:0004672|GO:0006468
Mal5g3795 382 MobiDBLite consensus disorder prediction 1 45 - -
Mal5g3795 382 SUPERFAMILY Protein kinase-like (PK-like) 54 352 IPR011009 -
Mal5g3795 382 PANTHER OS01G0588500 PROTEIN-RELATED 18 379 - -
Mal5g3795 382 ProSitePatterns Protein kinases ATP-binding region signature. 78 106 IPR017441 GO:0005524
Mal5g3795 382 MobiDBLite consensus disorder prediction 360 382 - -
Mal5g3795 382 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL20-RELATED 18 379 - -
Mal5g3795 382 MobiDBLite consensus disorder prediction 12 44 - -
Mal5g3795 382 Gene3D Phosphorylase Kinase; domain 1 52 157 - -
Mal5g3795 382 CDD STKc_IRAK 78 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3795 Mal-Chr5 106517487 106520701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3795 3 353 Glycoside Hydrolase AT3G07070 42.659 9.38e-92 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal5g3795 PK_Tyr_Ser-Thr 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3795 - K00924 gmx:100305403 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3795 5 106517487 106520701 Mal5g3795 5 106517487 106520701 ECH
Mal6g1500 6 27959240 27961783 Mal5g3795 5 106517487 106520701 PCT