Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3791 ATGGCTGTTCAAGCTCAATATCCATCTAATATCCTTCTTCTTAACAACAACAACAGAAATGGTCAAGAAGGGCATGATCAATACTCCTTACAACAACAACAATCACCAGGAGCATTAGGACTATCACTCCTTGATCAAACTCATCATCATTCCCATATCCTATGCAACAACAACACAACAGGTACTACTAATTCTTCTCGCAAAAGAGGAAGAGAAACAGGAACAGGACACAATACTACATCCCCTAATGTTATCAATCATTTCTCTTTACAATCTCAACCTTCACAAATTATTCATCTTTCTCAACTCCAAAATCATCATCATCAACAACAAAATGTCGTCTCCACTGGCCTTCGTTTATCATTCGATGATCATCAACAACATAGATTACAATTACAACTTCATCAACAACAACAAAGTTGTCACTCTTCAACTTTCTCATCTCTATTATCACAAGGACTCATTTCTCAAATCAAACAACAACACGATGAATTAGACCAATTCCTTCAAACCCAGGGAGAGAATCTACGGCGGACATTGGCGGAGAAGAGGCAAAGACAATACCGTGAACTACTAAACACGGCGGAAGAAGCGGTGGCGCACCGTCTCAGAGAGAAAGAAGCGGAATTCGCAAAAGCCACGCGCAAGAACGCGGAGTTAGAAGCGCGTGCAGCCCAATTAACCATGGAAGCCCAAGTCTGGCAGGCAAAAGCCCGGGCCCAAGAAGCCGCCGCAGCCTCTCTTCAGGCCCAGCTGCAACAGACAATAATGTGTCAAACCGGTGAAGACGCCGGCGGCGGAGGTGTTTCCTGCGCCGTGGAAGGACAGGCTGAGGATGCCGAATCGGCTTATATTGATCCGGATAGAGTGGTGGTTGTTGCAGCAGCGGAGGCGCGTGGGAAATGTAGAGGGTGTGAGAAGCGCGTGGCTACGGTGGTTGTTTTGCCTTGTCGGCATTTGTGTGTGTGTACAGAATGCGATGCGCATTTCAGAGTTTGCCCTGTTTGCTTTACTCTCAAGAATTCAACCGTTGAGGTCTTTCTCTCTTAG 1050 0.4581 MAVQAQYPSNILLLNNNNRNGQEGHDQYSLQQQQSPGALGLSLLDQTHHHSHILCNNNTTGTTNSSRKRGRETGTGHNTTSPNVINHFSLQSQPSQIIHLSQLQNHHHQQQNVVSTGLRLSFDDHQQHRLQLQLHQQQQSCHSSTFSSLLSQGLISQIKQQHDELDQFLQTQGENLRRTLAEKRQRQYRELLNTAEEAVAHRLREKEAEFAKATRKNAELEARAAQLTMEAQVWQAKARAQEAAAASLQAQLQQTIMCQTGEDAGGGGVSCAVEGQAEDAESAYIDPDRVVVVAAAEARGKCRGCEKRVATVVVLPCRHLCVCTECDAHFRVCPVCFTLKNSTVEVFLS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3791 349 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 293 349 IPR013083 -
Mal5g3791 349 MobiDBLite consensus disorder prediction 54 82 - -
Mal5g3791 349 PIRSF SBP1_RNase_bind 1 349 IPR017066 -
Mal5g3791 349 Pfam Zinc finger, C3HC4 type (RING finger) 300 336 - -
Mal5g3791 349 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 348 IPR017066 -
Mal5g3791 349 Coils Coil 203 237 - -
Mal5g3791 349 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 1 348 - -
Mal5g3791 349 ProSiteProfiles Zinc finger RING-type profile. 302 336 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3791 Mal-Chr5 106434870 106436222 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3791 K19042 - gmx:100788924 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1495 6 27799891 27801176 Mal5g3791 5 106434870 106436222 PCT