Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3763 ATGGAAGGAGCATCACTGCCACCAGGTTTTCGTTTCCATCCAACTGATGAAGAACTAGTTGGATACTATCTTAAGAGAAAAGTGGAAGGACTTGAAATTGAGCTTGATGTTATCCCAGCGATTGATTTTTACAAATTCGATCCATGGGAGTTACCTGAGAAATCGTTTCTACCAAGACGAGATTCAGAGTGGTTTTTCTATTGTCCACGGGATCGAAAGTACCCAAATGGATCAAGAACAAATAGAGCTACCAAAGCTGGCTACTGGAAAGCCACTGGAAAAGAGAGAAAGATTGTGTGCCAGTTTACTTCATCCACTATCACAGGCAACTGCAAAACACTTGTTTTCTATCTTGGAAGGGCTCCTTTAGGTGATAGAACTAACTGGATCATGCATGAGTATCTCCTTACCAATGATCCTAGCCAAGACTTTAAGGGTGATTTTGCTTTGTGCCGAGTTATTAAAAAGAATGAAAAAATCAAGAGGGTTGCAACAAACTCTTCCATCAGTGGAAGTGAGACCTCAATGAGATTCTCAAGTAACCTTTTATGCATATCTGGTGATGTTTCTTCTCAAGCAAGTCACCTGAAAAATGAGAGTCTATCACAAAATGTGGCTCCAATTGCTGAGTTTAACCATGTTTCCATGGAAACAAATCCTTCAAACTTCTGGATCTCCCCTGATATGATACTTGATTCTTCAAAGGAGTACAGTCAAGTACAAGATACAGTGTCTGAATATTTTCCTTCTAGGTGTGACTCACCAAGGCAATCATTGGAACATATAACAATTTCACCTAGTTTATCCTACTCAAATTTTAATGGTGAAATTGAATTTTCTGATAATGCAAGTCAAATTGGAAGCATGTCACCTTACTCAAATCAAGGGAATTTCATGGACTATTATGGAAATTGGGATGTTCCTTATGGGGTTTATGATCAAATTAATTCAGTCTCATATCCAGAGCCTCTCTAA 975 0.3856 MEGASLPPGFRFHPTDEELVGYYLKRKVEGLEIELDVIPAIDFYKFDPWELPEKSFLPRRDSEWFFYCPRDRKYPNGSRTNRATKAGYWKATGKERKIVCQFTSSTITGNCKTLVFYLGRAPLGDRTNWIMHEYLLTNDPSQDFKGDFALCRVIKKNEKIKRVATNSSISGSETSMRFSSNLLCISGDVSSQASHLKNESLSQNVAPIAEFNHVSMETNPSNFWISPDMILDSSKEYSQVQDTVSEYFPSRCDSPRQSLEHITISPSLSYSNFNGEIEFSDNASQIGSMSPYSNQGNFMDYYGNWDVPYGVYDQINSVSYPEPL* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3763 324 Gene3D NAC domain 15 162 IPR036093 GO:0003677|GO:0006355
Mal5g3763 324 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Mal5g3763 324 Pfam No apical meristem (NAM) protein 7 135 IPR003441 GO:0003677|GO:0006355
Mal5g3763 324 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 323 - -
Mal5g3763 324 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Mal5g3763 324 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3763 Mal-Chr5 105773872 105775524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3763 1 301 NAC Transcription Factor Family AT4G17980 52.769 1.53e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal5g3763 NAM 7.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3763 - - mtr:MTR_4g098630 538.88