Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3750 ATGGATTCCCGTTCAGCTCCACAACCACAACCAACTATGATGGTGGGACCCACATCTTACGCTCTAACAAACCCTTCCATGATCAGCCCTAATTCCTCCACCACCACCACCACGGCGAACATCATGGCACCCGCCACCGCTCGTTTCCCTTTCGCTTCATCGCAATCTGAGCCGTTTTCCGTCACTCACGACGGTCCTTCCTCCCCGTCGACGGTTGGAAAGAAGAAACGTGGCCGGCCGAGGAAATACTCGCCTGATGGTAACATTGCTCTTGGTTTGGCTCCTGTTTCTTCACCTGTTGCTGCTACGTCGGCTGCTTCGGCTGGTGATTCTGGAAACGCCGATGCGCCTCCGAAGAAACATAGAGGAAGACCGCCTGGTTCTGGGAAGAAACAGTTAGATGCGCTTGGTGCTGGTGGGACTGGATTTACTCCACACGTAATCTTGGTGGAGTCTGGTGAGGACATCACAGAAAAAGTTATGGCCTTCTCTCAGAACGGGCCTCGGACGGTTTGTATTCTTTCTGCCATTGGTGCAATCAGCAGTGCAATCCTTCGACAGCCAGCATCTGGAAGTGTTGCAAGATATGAGGGCCAATATGAGATCATATCGTTATCAGGTCCTATGCCGCTATCTGAAACTAATAGTGAACAAAGCAGAACAAGCAGTTTATACGTTTCCATGGCAGGGTCTGATGGACGAGTTATGGGGGGTGCAGTTGCTGGCATGCTAACTGCAGCGTCGACTGTACAGGTCATTGTGGGTAGCTTTATCGTGGATCGGAAAAAGTCAAGCTCAAGTATGGTGAAATCTGGGCCTTCTTCAGCACCAACTTCCCAAATGTTGAACTTCGGGGCACCTACGACTCCAACTAGTCCTACTTCTCAAGGGCCTTCAACCGAGTCCTCAGAGGAAAATGATCATAATAGTAATTTTAGTAGGGGACCTGGACTCTACAATAATGCTAATCAGCCTGTTCATAATAACATGCAACAGATGTACCACCATCCACTATGGGCTGGCCAAACTCATCAGTGA 1038 0.499 MDSRSAPQPQPTMMVGPTSYALTNPSMISPNSSTTTTTANIMAPATARFPFASSQSEPFSVTHDGPSSPSTVGKKKRGRPRKYSPDGNIALGLAPVSSPVAATSAASAGDSGNADAPPKKHRGRPPGSGKKQLDALGAGGTGFTPHVILVESGEDITEKVMAFSQNGPRTVCILSAIGAISSAILRQPASGSVARYEGQYEIISLSGPMPLSETNSEQSRTSSLYVSMAGSDGRVMGGAVAGMLTAASTVQVIVGSFIVDRKKSSSSMVKSGPSSAPTSQMLNFGAPTTPTSPTSQGPSTESSEENDHNSNFSRGPGLYNNANQPVHNNMQQMYHHPLWAGQTHQ* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3750 345 MobiDBLite consensus disorder prediction 54 139 - -
Mal5g3750 345 ProSiteProfiles PPC domain profile profile. 140 279 IPR005175 -
Mal5g3750 345 MobiDBLite consensus disorder prediction 264 325 - -
Mal5g3750 345 MobiDBLite consensus disorder prediction 54 69 - -
Mal5g3750 345 SUPERFAMILY AF0104/ALDC/Ptd012-like 142 258 - -
Mal5g3750 345 SMART AT_hook_2 119 131 IPR017956 GO:0003677
Mal5g3750 345 SMART AT_hook_2 74 86 IPR017956 GO:0003677
Mal5g3750 345 Pfam Plants and Prokaryotes Conserved (PCC) domain 145 257 IPR005175 -
Mal5g3750 345 Gene3D - 145 271 - -
Mal5g3750 345 MobiDBLite consensus disorder prediction 1 38 - -
Mal5g3750 345 CDD DUF296 144 257 IPR005175 -
Mal5g3750 345 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 39 315 - -
Mal5g3750 345 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 39 315 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3750 Mal-Chr5 105636255 105641305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3750 74 345 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 47.267 2.13e-69 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3750 - - mtr:MTR_4g098460 422.165