Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3747 ATGGAGGAAATCAACAGCACACCAATGAACGTATCAGAGGAAATGATGGATGAATACATATTATTTGATGAGGAGTGCTGCTTGAACTTGCTTGATGCTGATGAGGAGCAAGAGTTTTTTTCAAGTGACACAGCTAGTGCCCTTGCCTTTGAGGAACATACACAAGCCCTACAACAATGTTTAACTACGGATTGCATTTCCACAACTCTGAGTGAAACAAGCTTTGAATCTTTTGATGACTTTGATTTTGAGAAACCAGCTAAACAGCTAAAAATAATTGATCAGAGTGACAATGATAACATCACCGAAAACTTGTCACAACAACTTTCTGCATCACCAACCTCCTTGTCATCTCAGATCCTGTCTTTTGACAATCCAAACCCAACAGAATTTTTTGGGTTTGATAAAAAACAGAACGAGACCACGTCAGTGTCGTTGCCCAATTTGGGAAACACACATTTATCAAATCAAACCTCAAAAGGGTCTTTAGAAAATCAATACTTGGAAACAAAAACATCACAATCTAAGAGGTCTCGAGCTCATGCAAAAGATCACATTATGGCCGAGAGAAAACGAAGAGAGAAACTCAGCCAAAGCTTCATTGCTCTTGTTGCTCTCATTCGTGACCTAAAGAAGATGGACAAGGCTTCAGTATTAGAGGATACAATCAAATACATCAAAGAGCTTAAAGAGCGTTTGGTAATTTTAGAAGAGCAGGGAAAGAAAACAAATGCCGACTCAATGGTGGTTTCGACGAAACCAGATCTGTGCAGCGACGAGCATTATTCATCATCTGATGAGAGTCTTGAAACTGAAAGTGTTGCGGATGATACTGCCACTGAATCACTCGTCAAGGTGGAAGCAAAAATGTCAGGAAAAGAGATGCTGATTAGGATCCATTGCCAAAAGCATAATGAACTTCTTGTTAAAATCATGGCAGAGATTCAAAGTTTTCAACTGTTTGTTGTCAATAACAGTGTCTTATCCTTTGGAGATTCTATCCACGACATTACCATCATTCCTGGGATTGGTGAAGGGTACAACTTGACCATAAAGGAACTCGTCCAGAACCTACGCATAGCCGCATTGAAGTTTATTTCTTCCTAG 1107 0.3966 MEEINSTPMNVSEEMMDEYILFDEECCLNLLDADEEQEFFSSDTASALAFEEHTQALQQCLTTDCISTTLSETSFESFDDFDFEKPAKQLKIIDQSDNDNITENLSQQLSASPTSLSSQILSFDNPNPTEFFGFDKKQNETTSVSLPNLGNTHLSNQTSKGSLENQYLETKTSQSKRSRAHAKDHIMAERKRREKLSQSFIALVALIRDLKKMDKASVLEDTIKYIKELKERLVILEEQGKKTNADSMVVSTKPDLCSDEHYSSSDESLETESVADDTATESLVKVEAKMSGKEMLIRIHCQKHNELLVKIMAEIQSFQLFVVNNSVLSFGDSIHDITIIPGIGEGYNLTIKELVQNLRIAALKFISS* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3747 368 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 10 367 - -
Mal5g3747 368 SMART finulus 186 235 IPR011598 GO:0046983
Mal5g3747 368 Gene3D - 169 231 IPR036638 GO:0046983
Mal5g3747 368 MobiDBLite consensus disorder prediction 174 190 - -
Mal5g3747 368 MobiDBLite consensus disorder prediction 142 190 - -
Mal5g3747 368 Coils Coil 219 246 - -
Mal5g3747 368 MobiDBLite consensus disorder prediction 142 173 - -
Mal5g3747 368 PANTHER BHLH TRANSCRIPTION FACTOR 10 367 - -
Mal5g3747 368 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 185 246 IPR036638 GO:0046983
Mal5g3747 368 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 180 229 IPR011598 GO:0046983
Mal5g3747 368 Pfam Helix-loop-helix DNA-binding domain 185 230 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3747 Mal-Chr5 105572030 105574703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3747 77 366 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.027 3.21e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g3747 HLH 2.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3747 - - mtr:MTR_4g098035 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3747 5 105572030 105574703 Mal5g3747 5 105572030 105574703 ECH