Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3746 ATGGCGGAAATTAACAACACACCAATGAATGTATCAGAAGAAACCAGCAAATGGTTATCTGATTTGGAAATGGATGAATACAATTTATTTCCTGAGGAACGCAACCTGAATTTCCTTGTTGCTAATGAGGAAGAGTTTCTTTCACATGTCTTTCAAGAACAAACCCAAAACCAATGTTTGACTTCAGAGTCCACTTTCACTAATGAAACAAGTTTTGAGTCTTTTGACTATGATTTTGAAACTGAGAGACCAATCTTGGAGCTGAAAACAATTGATCCTAGTGATAAAATCATTGAAACCATTTCACCAAAACTTTCTCCATCATCATCTAACTCATCTTTGCAGTCTCAGATTCTATCTTTTGACAACCAAAACTCACCTCCTATTAGCACCCCTCAAATTTATGGATTCACCCCTACCTTAAACTCAAAACATAACGAAACAGTGTCAATGTCTCCACCCCAATTGGAAAACATGAATATCTCAGCTCAAACTCCTAAAGGGTCATCAAAAAGTCAGAACTTGGAAACAAAAACCTCACAAAGCAAAAGGTCTCGAGCTAACGCCGATGACCATATCATGGCTGAGAGAAAGCGAAGAGAGAAACTTAGCCAAAGCTTCATTGCTCTTGCAGCTCTTGTTCCTAACCTTAAAAAGATGGATAAGGCTTCTGTATTAGCAGAGTCTATCAAATACGTGAAAGAGCTCAAAGAGCGTTTGGAAATTTTGGAAGAACAGAACAAGAAATCAAAGGCAGAGTCAGTGGTTGTTCTAAACAAACCAGACCTCCTTATCAATGATGATGCTGATAACTCATCATGCGATGAAAGTATTGAAGGTGCTGCTGGTTCATCCGTACAAGTGGAAGCAAGAGTATCAGGGAAAGAGATGCTGATTCGGATTCACTGTCAGAAGCAAAAGGGACTTTTGATTAAAATCATGGCAGAGATTCAAAGCTTTCAATTGTTTGTTGTCAATAGCAGTGTCTTACCTTTTGGAGATTCTATCCTTGACATCACCATCATTGCTAAGGTGAGTGAAGGATACAACTTGAGCACGAAGGAACTTGTGAAGAACCTACGCATGGCAACATTGAAGTTTATGTCATTATAA 1113 0.3854 MAEINNTPMNVSEETSKWLSDLEMDEYNLFPEERNLNFLVANEEEFLSHVFQEQTQNQCLTSESTFTNETSFESFDYDFETERPILELKTIDPSDKIIETISPKLSPSSSNSSLQSQILSFDNQNSPPISTPQIYGFTPTLNSKHNETVSMSPPQLENMNISAQTPKGSSKSQNLETKTSQSKRSRANADDHIMAERKRREKLSQSFIALAALVPNLKKMDKASVLAESIKYVKELKERLEILEEQNKKSKAESVVVLNKPDLLINDDADNSSCDESIEGAAGSSVQVEARVSGKEMLIRIHCQKQKGLLIKIMAEIQSFQLFVVNSSVLPFGDSILDITIIAKVSEGYNLSTKELVKNLRMATLKFMSL* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3746 370 PANTHER BHLH TRANSCRIPTION FACTOR 6 369 - -
Mal5g3746 370 Pfam Helix-loop-helix DNA-binding domain 192 236 IPR011598 GO:0046983
Mal5g3746 370 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 6 369 - -
Mal5g3746 370 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 192 252 IPR036638 GO:0046983
Mal5g3746 370 MobiDBLite consensus disorder prediction 101 182 - -
Mal5g3746 370 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 187 236 IPR011598 GO:0046983
Mal5g3746 370 SMART finulus 193 242 IPR011598 GO:0046983
Mal5g3746 370 MobiDBLite consensus disorder prediction 101 191 - -
Mal5g3746 370 Coils Coil 226 253 - -
Mal5g3746 370 Gene3D - 174 253 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3746 Mal-Chr5 105561520 105565599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3746 15 368 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 37.326 1.98e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g3746 HLH 6.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3746 - - gmx:100788128 379.022