Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3745 ATGGAGGAAATCAATCACACACCAATGAACGTATCAGAAGAAACCAGCAAATGGTTATCTGATTTGGAAATGGATGAATACAATTTATTTCCTGAGGAACGCAACCTGAATTTCCTTGATGCTGATGAGAAAGAGTTTCTTTCACATGACATAGCAAGTGTCTTTCAAGAAGAACAAACCCAACAACAATGTTTGACTTCAGAATCCACTTCCACAGCTCTCACCAACTCATTCACTGATGAAACAAATTTTGAGTCTTTTGACTTTGATTTTGAAATTGAGAGACCAACCAATGATCGCAGTAACAACATCATCACTGAATCCTTTTCACCAAAACTTTCTCCATCATCATCTAACTCATCCTTGCAGTCTCAGATACTGTCTTTTGACAAACAAAACTCACCAGCTACTTACACCCCCCAAATTTATGGATTCACCCCTACCTTAAACTCAAAACAGAACGAAACAGTGTCAGTGTCTCAACCCCAATTGGGAAATGTCTCAACTCAAAATCCTAAAAGGTCATCAAAAAACCAAAACTTTGAAAGAAAAACCTCTCAAAGCAAAAGGTCTCGAGCTAACGCCGATGACCATATCATGGCTGAGAGAAAACGAAGAGAGAAACTTAGCCAAAGCTTCATTGCTCTTGCAGCTCTTGTTCCTAACCTTAAAAAGATGGACAAAGCTTCTGTGTTAACAGACTCTATCAAATACATGAAAGAGCTTAAAGAGCGTTTGGAAGTTTTGGAAGAACAGAACAAAAAAACAAAGGCAGAGTCAGTGGTGGTTCTGAACACACCAGACCTTCATATCAATGATGATGATAAGTCATCATGTGATGAGAGTATTGAAGGTGATGCTGGTTCATCTGTACAAGTGGAAGCAAGAGTATCAGGGAAAAAGATGCTGATTCGAATTAACTGTGAGAAGCACAAGGGGGTCCTAGTGAAAATCATGGCTGAGATTCAAAGCTTTCAATTGTTTGTTGTGACTAGCAGTGTCTTACCTTTTGGGGATTCCATTGACATCACCATCATTGCTCAGATGGGTGAAGGGTACAACTTGACCATCAAGGAACTTGTCAAGAACCTACGCACGGCAGCATTGAAGTTTATGTCATCACAGCATGATGAATGA 1137 0.3958 MEEINHTPMNVSEETSKWLSDLEMDEYNLFPEERNLNFLDADEKEFLSHDIASVFQEEQTQQQCLTSESTSTALTNSFTDETNFESFDFDFEIERPTNDRSNNIITESFSPKLSPSSSNSSLQSQILSFDKQNSPATYTPQIYGFTPTLNSKQNETVSVSQPQLGNVSTQNPKRSSKNQNFERKTSQSKRSRANADDHIMAERKRREKLSQSFIALAALVPNLKKMDKASVLTDSIKYMKELKERLEVLEEQNKKTKAESVVVLNTPDLHINDDDKSSCDESIEGDAGSSVQVEARVSGKKMLIRINCEKHKGVLVKIMAEIQSFQLFVVTSSVLPFGDSIDITIIAQMGEGYNLTIKELVKNLRTAALKFMSSQHDE* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3745 378 MobiDBLite consensus disorder prediction 98 126 - -
Mal5g3745 378 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 193 242 IPR011598 GO:0046983
Mal5g3745 378 MobiDBLite consensus disorder prediction 153 198 - -
Mal5g3745 378 PANTHER BHLH TRANSCRIPTION FACTOR 6 373 - -
Mal5g3745 378 Pfam Helix-loop-helix DNA-binding domain 198 242 IPR011598 GO:0046983
Mal5g3745 378 MobiDBLite consensus disorder prediction 153 176 - -
Mal5g3745 378 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 6 373 - -
Mal5g3745 378 SMART finulus 199 248 IPR011598 GO:0046983
Mal5g3745 378 Gene3D - 169 259 IPR036638 GO:0046983
Mal5g3745 378 MobiDBLite consensus disorder prediction 177 198 - -
Mal5g3745 378 Coils Coil 232 259 - -
Mal5g3745 378 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 198 259 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3745 Mal-Chr5 105554483 105558013 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3745 111 372 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.149 7.51e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g3745 HLH 3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3745 - - gmx:100788128 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3745 5 105554483 105558013 Mal5g3745 5 105554483 105558013 ECH
Mal6g1448 6 26379197 26403070 Mal5g3745 5 105554483 105558013 PCT