Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3744 ATGGAGGTGCTGTCGTATAAAATCCAACGAAACAACTTGTTCTTTTCTAGACAGGATTATTCAGCTAGAGCCAGTGGAGGTAATAAATTTCATTTTCTCCTAGAATGTATCTATCAATCACATAGTATTTTCTTAATATCAAATCATATAACCAATTTTTCATTTCTTTCAGTATCATTGATTCTTGGCTTGCTTGCAAATAACAAGCATATAACTTCAATGGAGGATTTGTGGACTAATTGGTTATGTGACATGGAACCAAATGATTACAGTTTCATAAACCAATCAAGTATAAACGCAGAATTTGTTGGTAGTTTAGAGAGTAACTTTGAGAGGCCTTCAAAATTACTCAAAACTACTACTACTACTTGCAGCTCAAACTATGTCAAAACAGAACACCTCTATCAAAAAACAGCTTCATATATTCTTTCCTTTGAAAACGAGAATCCACCACCAAAAACCAAAGTTGTGACCTCAAAGAATGGACCAAGACGTGTAAAGAATCATGAGAGCAACAAGAAGAGCGGTTCATTTTCCAAATCTACAACTCATCACACACCAGATCACATAATTGCTGAGAGAATAAGGAGAGAAAAGATTAGCCAACAATTCATAGCTCTTTCAGCCCTTATTCCAAACCTCAAAAAGATGGACAAGGCCTCTGTGTTAGGTGATACTATAAAGTATGTGAAGGAGCTTAAGGAGCAAGTGAAAGAGTTGGAGGAGCAAACCAAAAGAAAAAACTTAGAACCGGTTGTGGTTGTAAAGAAATTGTCTGAACTATCTGCGGACGAAGATGTTTCGGACACTTCCTCAAATTCATGTAATGAAAACTCTGATCAAACCTCAAAAACAAATCTGTTTCTACCAGAAGTTGAAGCTAGGTTGTCAGGGAAGAATGTGCTGATTCGAATCCTCTGTGAGAAGGATAAAGCAGTGATGGTGAATGTTTATAGAGAGATAGAGAAACTTCGTCTCTCGGTTATCAATGCTAGTTGCCTTTCCTTTGGTTCCTCTGTTCTGGCCATAACCATCATCGCCCAGATGGAGGATGAATTGAACATGAGCGTGCAGAAACTGGCAAAAAAATTGAAAGTTGTACTGGTGCAATTGAATTAG 1119 0.3727 MEVLSYKIQRNNLFFSRQDYSARASGGNKFHFLLECIYQSHSIFLISNHITNFSFLSVSLILGLLANNKHITSMEDLWTNWLCDMEPNDYSFINQSSINAEFVGSLESNFERPSKLLKTTTTTCSSNYVKTEHLYQKTASYILSFENENPPPKTKVVTSKNGPRRVKNHESNKKSGSFSKSTTHHTPDHIIAERIRREKISQQFIALSALIPNLKKMDKASVLGDTIKYVKELKEQVKELEEQTKRKNLEPVVVVKKLSELSADEDVSDTSSNSCNENSDQTSKTNLFLPEVEARLSGKNVLIRILCEKDKAVMVNVYREIEKLRLSVINASCLSFGSSVLAITIIAQMEDELNMSVQKLAKKLKVVLVQLN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3744 372 Coils Coil 223 250 - -
Mal5g3744 372 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 184 233 IPR011598 GO:0046983
Mal5g3744 372 Gene3D - 184 253 IPR036638 GO:0046983
Mal5g3744 372 MobiDBLite consensus disorder prediction 150 186 - -
Mal5g3744 372 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 189 253 IPR036638 GO:0046983
Mal5g3744 372 SMART finulus 190 239 IPR011598 GO:0046983
Mal5g3744 372 Pfam Helix-loop-helix DNA-binding domain 189 233 IPR011598 GO:0046983
Mal5g3744 372 PANTHER BHLH TRANSCRIPTION FACTOR 105 372 - -
Mal5g3744 372 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 105 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3744 Mal-Chr5 105537798 105540728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3744 74 368 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.138 8.93e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g3744 HLH 2.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3744 - - cam:101494527 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3744 5 105537798 105540728 Mal5g3744 5 105537798 105540728 ECH