Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3743 ATGATTCAAATTTCGTCTAGCAAGTACATGCCTGAATTTGTATTAATGGAGGACACTACTTTGTTTAATGATCATGAATACCCAATGGATTCATTTGCATTCGAGTTCGATGATATGGCATACTTCAACTCTTTCTCAGCTTCACCAGAGAGTACTTATTCCTCTCATAACAATACCAACAACAACAACAAGCGACTCCATTCCGAAAGCACACAGAACAGTTCTTTCCCCACTGAAAGTCCTGATCAATCTGTTGCTTCAGCAACACCACCAACAAAACCACTCAAGGCTTCTCCCAAAATAATTTCATTTGACCACTCCAATAATGATTCTTCTCAACAATTTTACAACATGGATGCTAAGGTTAAGAAGCCTAAAATCGAGACGGGGTATGGTGAAAACTTGAATTTTGGAAGTGTGGTTTCTGAATGTGATTATGATAAACGCGAGAACAAGGTTGCCATAACAACGACGAATAGAAACTCAATCCAGGCTCGAGATCATGTAATCGCCGAAAGAAAACGAAGAGAAAAGCTTAGCCAGAGGTTCATTGCTCTTTCCTCCATTCTTCCTGGACTCAAAAAGATGGACAAGGCAACTATTTTAGAAGATGCTATAAAACATATGAAGCAACTAAAGGAAAGAGTGAAGACTTTGGAGGAACAAGTAGCCGATAAAAAAGTCGAATCAGCCGTTTTTGTGAAGAGATCTATTCTCTTCGACGAAGATAATAATAGCTCCTCTTGCGACGAAAACTCCGACCAATCACTCCCGAAAATCGAAGCAAGAGTTTTTGGAAAAGACATGCTCATCAGAATCCACTGTGACAAGGATTGTGGCCGAACTGCGACCGCAATACTCTACGAATTGGAAAAACATCATCTCACTATTCAAAGTAGTTCTGTCTTACCATTTGGAAATAATTATCTTGACATAACCATTGTTGCTCAGATGAACAAAGAATATTGCTTGACAATAAAGGATCTCGTAAGAAGCATAAGTCAGATTTTGAGACAGCTCATTTGA 1026 0.3889 MIQISSSKYMPEFVLMEDTTLFNDHEYPMDSFAFEFDDMAYFNSFSASPESTYSSHNNTNNNNKRLHSESTQNSSFPTESPDQSVASATPPTKPLKASPKIISFDHSNNDSSQQFYNMDAKVKKPKIETGYGENLNFGSVVSECDYDKRENKVAITTTNRNSIQARDHVIAERKRREKLSQRFIALSSILPGLKKMDKATILEDAIKHMKQLKERVKTLEEQVADKKVESAVFVKRSILFDEDNNSSSCDENSDQSLPKIEARVFGKDMLIRIHCDKDCGRTATAILYELEKHHLTIQSSSVLPFGNNYLDITIVAQMNKEYCLTIKDLVRSISQILRQLI* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3743 341 PANTHER TRANSCRIPTION FACTOR NAI1 5 340 - -
Mal5g3743 341 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 230 IPR036638 GO:0046983
Mal5g3743 341 Gene3D - 155 228 IPR036638 GO:0046983
Mal5g3743 341 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 212 IPR011598 GO:0046983
Mal5g3743 341 Pfam Helix-loop-helix DNA-binding domain 167 213 IPR011598 GO:0046983
Mal5g3743 341 MobiDBLite consensus disorder prediction 49 91 - -
Mal5g3743 341 MobiDBLite consensus disorder prediction 49 98 - -
Mal5g3743 341 CDD bHLH_AtNAI1_like 165 237 - -
Mal5g3743 341 Coils Coil 202 229 - -
Mal5g3743 341 PANTHER BHLH TRANSCRIPTION FACTOR 5 340 - -
Mal5g3743 341 SMART finulus 169 218 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3743 Mal-Chr5 105520501 105522001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3743 84 341 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.751 2.54e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g3743 HLH 3.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3743 - - mtr:MTR_4g097920 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1445 6 26321444 26323539 Mal5g3743 5 105520501 105522001 PCT