Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3740 ATGCTTCCCCTTCTACCACTCCTCCTCTTCCTCTTCTCATTCAACCTAGTAGTTTCCACAACACACATCTCAGAATACCACACACTCCTCTCTTTCAAATCCTCCATCACAAACGACCCAAAAAACATCCTCACCTCATGGAACCCAAAAACCCCTTACTGTTCCTGGTACGGTATCACATGTTCCCAACACCGCCACGTCACTTCTCTCTCCCTCACCTCCCTCTCTCTCACCGGAACTCTCTCCTCCTCTCTCTCCAACCTCCCTTTCCTCACCAATCTCTCCCTCGCCGACAACAAATTCTCCGGCCCAATTCCTCCCTCTCTCTCATCTCTCTCCTCTCTCCGTTTTCTCAACCTCTCCAACAATATCTTCAACGGTACTCTCCCTTCTGAACTCTCTAACCTCTTCAATCTTCAAGTTCTTGATCTCTACAACAATAACATGACCGGTTCACTTCCTCTTTCGGTCACCCATCTCAAATTTCTCCGTCATTTACATCTTGGTGGTAACTTTTTCACCGGAAAAATACCTCCTGAGTATGGCTCTTGGGTTCATTTAGAATATCTTGCTATTTCCGGTAATGAACTTTCTGGAACTATTCCACCGGAGTTAGGTAACATTACTTCCCTTAAAGAGCTTTACATTGGTTACTTTAACACTTACGATGGAGGTATTCCGCCGGAGATTGGAAATTTATCGGAGATGGTGAGATTTGATGCTGCTTACTGTGGTTTAACTGGTGAGGTGCCACCGGAGTTGGGTAAGCTTCAGAAGTTGGATACTTTGTTTCTTCAAGTAAATGCACTTTCTGGGTCGCTTACAAAAGAGCTAGGGAACTTGAAGAGCTTGAAATCGATGGATTTGTCGAATAATGCATTTTCCGGTGAAGTTCCGGTGAGTTTTGCTGAGCTGAAGAATTTGACACTTTTGAATTTGTTTAGAAATAAGCTTCATGGTGCTATACCGGAGTTTATCGGAGAAATGCCGGCGCTTGAAGTGTTGCAGATTTGGGAGAATAATTTCACTGGAAGCATTCCTCAGAATTTGGGGAAAAATGGAAAACTCACTCTTGTTGATGTTTCTTCAAACAAGTTAACTGGTTCTCTTCCACCGTTTATGTGTTTTGGGAACAAGCTTCAAACTTTGATAACTTTGGGGAATTTTCTTTTTGGTCCTATTCCAGATTCACTTGGAAAGTGTAAATCTTTGAGTAGAATAAGAATGGGTGAGAATTTTCTTAATGGGTCAATTCCAAAAGGACTTTTTGGTCTTCCTGAATTGACACAAGTTGAGCTTCAAGATAATCTTTTATCTGGAAACTTTCCTCAACCTTTTTCAATGTCTCCAAATCTTGGTCAAGTTACTCTTTCCAATAACAAGCTTTCTGGGCCATTACCACCTTCCATTGGAAACTTTACCAGTGTTCAAAAGCTGCTTCTTGATGGAAACCAGTTTTCAGGTACAATCCCTGCTGAGATTGGAAAGTTGCAACAGCTTTCAAAGATTGATTTTAGTCACAACAAATTTTCTGGTTCTATTGCTCCTGAGATAAGTCATTGTAAGCTTTTAACTTTTGTTGATCTTAGTCGTAATGAGCTTTCTGGTGAGATTCCTAAACAAATCACTAAGATGAAGATATTGAATTACTTGAACCTTTCAAGGAACCACCTTGTTGGTACTATTCCAGGTTCTATTGCTTCAATGCAAAGTTTAACTTCTGTTGATTTTTCATACAATAATCTAACTGGTTTGGTTCCTAGTACTGGCCAATTTAGTTACTTTAACTACACTTCTTTCCTTGGTAACCCTGAACTTTGTGGACCTTATTTGGGTCCTTGCAAAGATGGTGTTGCTAATGGACCTCGTCAACCTCACGTTAAAGGACCACTATCTTCTACTGTGAAGCTTTTGCTTGTTGTTGGGTTGCTTGTTTGCTCCAGTATATTTGCTGTTGCAACAATATTCAAAGCTAGGTCTTTGAAAAAGGCGAATGAAGCTCGTGCGTGGAAATTAACCGCTTTCCAACGTTTGGACTTCACGGTTGATGATGTTCTTGATTCCTTGAAAGAGGACAACATCATAGGAAAAGGTGGTGCTGGAATTGTTTACAAAGGTGCTATGCCTAATGGTGATCTCGTTGCTGTGAAAAGGTTACCGGCTATGAGTAGAGGCTCTTCACATGATCATGGTTTCAATGCTGAGATTCAAACTTTGGGGAGAATTCGACACAGACACATTGTTAGATTATTGGGTTTCTGCTCAAACCATGAAACAAATCTCTTGGTTTATGAGTACATGCCTAATGGAAGTTTAGGTGAAGTTCTTCATGGTAAGAAAGGTGGTCATTTGCATTGGGATACAAGGTACAAAATTGCTGTGGAAGCTGCAAAGGGTCTTTGTTATCTACATCATGACTGTTCACCTCTTATTGTTCATCGTGATGTGAAATCAAACAATATCTTGCTTGATTCAGGCTTTGAAGCCCATGTTGCTGATTTTGGACTTGCTAAATTCTTGCAAGATTCTGGAACTTCTGAATGCATGTCTGCTATTGCTGGTTCTTATGGATACATAGCTCCAGAGTATGCATACACATTGAAAGTCGACGAAAAAAGCGATGTGTACAGCTTCGGTGTGGTACTTCTAGAGCTTGTAGCAGGAAGAAAACCAGTTGGAGAATTCGGTGATGGAGTAGACATTGTGCAATGGGTGCGAAAAACAACTGATTCAAACAAAGAAGGTGTTCTCAAAGTTCTTGATCCTAGACTTCCCTCGGTTCCACTTCATGAGGTGATGCATGTGTTCTATGTTGCCATGTTATGTGTTGAAGAACAAGCTGTAGAAAGACCAACTATGCGCGAAGTCGTTCAAATGCTTACCGAGCTTCCAAAACCACCTAGCTCAAAACATGTTGAAGAAGACTTAACAACATTAACAATCACTGAATCCTCTTTGTCATCATCAAACAATTTAGAGTCTCCATCTAAAGATCCTAAAGATCTTCTTAGCATATAA 3018 0.4069 MLPLLPLLLFLFSFNLVVSTTHISEYHTLLSFKSSITNDPKNILTSWNPKTPYCSWYGITCSQHRHVTSLSLTSLSLTGTLSSSLSNLPFLTNLSLADNKFSGPIPPSLSSLSSLRFLNLSNNIFNGTLPSELSNLFNLQVLDLYNNNMTGSLPLSVTHLKFLRHLHLGGNFFTGKIPPEYGSWVHLEYLAISGNELSGTIPPELGNITSLKELYIGYFNTYDGGIPPEIGNLSEMVRFDAAYCGLTGEVPPELGKLQKLDTLFLQVNALSGSLTKELGNLKSLKSMDLSNNAFSGEVPVSFAELKNLTLLNLFRNKLHGAIPEFIGEMPALEVLQIWENNFTGSIPQNLGKNGKLTLVDVSSNKLTGSLPPFMCFGNKLQTLITLGNFLFGPIPDSLGKCKSLSRIRMGENFLNGSIPKGLFGLPELTQVELQDNLLSGNFPQPFSMSPNLGQVTLSNNKLSGPLPPSIGNFTSVQKLLLDGNQFSGTIPAEIGKLQQLSKIDFSHNKFSGSIAPEISHCKLLTFVDLSRNELSGEIPKQITKMKILNYLNLSRNHLVGTIPGSIASMQSLTSVDFSYNNLTGLVPSTGQFSYFNYTSFLGNPELCGPYLGPCKDGVANGPRQPHVKGPLSSTVKLLLVVGLLVCSSIFAVATIFKARSLKKANEARAWKLTAFQRLDFTVDDVLDSLKEDNIIGKGGAGIVYKGAMPNGDLVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSGFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVAGRKPVGEFGDGVDIVQWVRKTTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQMLTELPKPPSSKHVEEDLTTLTITESSLSSSNNLESPSKDPKDLLSI* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3740 1005 Gene3D Transferase(Phosphotransferase) domain 1 767 984 - -
Mal5g3740 1005 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Mal5g3740 1005 Gene3D Phosphorylase Kinase; domain 1 654 766 - -
Mal5g3740 1005 Gene3D Ribonuclease Inhibitor 78 344 IPR032675 -
Mal5g3740 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Mal5g3740 1005 SUPERFAMILY RNI-like 78 323 - -
Mal5g3740 1005 Gene3D Ribonuclease Inhibitor 17 77 IPR032675 -
Mal5g3740 1005 Gene3D Ribonuclease Inhibitor 345 618 IPR032675 -
Mal5g3740 1005 SUPERFAMILY Protein kinase-like (PK-like) 682 960 IPR011009 -
Mal5g3740 1005 Pfam Leucine Rich Repeat 163 179 IPR001611 GO:0005515
Mal5g3740 1005 Pfam Leucine rich repeat 259 318 IPR001611 GO:0005515
Mal5g3740 1005 MobiDBLite consensus disorder prediction 973 997 - -
Mal5g3740 1005 ProSiteProfiles Protein kinase domain profile. 689 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g3740 1005 Coils Coil 1002 1005 - -
Mal5g3740 1005 MobiDBLite consensus disorder prediction 965 1005 - -
Mal5g3740 1005 Pfam Protein tyrosine and serine/threonine kinase 691 960 IPR001245 GO:0004672|GO:0006468
Mal5g3740 1005 SMART LRR_typ_2 112 135 IPR003591 -
Mal5g3740 1005 SMART LRR_typ_2 569 592 IPR003591 -
Mal5g3740 1005 SMART LRR_typ_2 305 329 IPR003591 -
Mal5g3740 1005 SMART LRR_typ_2 497 521 IPR003591 -
Mal5g3740 1005 SMART LRR_typ_2 281 304 IPR003591 -
Mal5g3740 1005 SMART LRR_typ_2 136 159 IPR003591 -
Mal5g3740 1005 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 6 1001 - -
Mal5g3740 1005 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 1001 - -
Mal5g3740 1005 SUPERFAMILY RNI-like 242 593 - -
Mal5g3740 1005 SMART serkin_6 689 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3740 Mal-Chr5 105387939 105391752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3740 23 995 Receptor kinase-like Gene Family AT5G65700 79.959 0.0 1580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal5g3740 PK_Tyr_Ser-Thr 7.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3740 - - gmx:547592 1639.4