Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3720 ATGAAGAGAATGGAAAATAATGATGATGGTGTTGACATTAACAATGGAAATAATTGGTTGGGTTTTTCACTCTCTCCTCAAATGAATAATATTGGTGTTTCTTCACACACTCATCATCACTCACAACCATCTTCTTCTGCTGCTTCTGAAGTAGTTCCACTTCAAGCAAGCTTTTACCACTCTTCCCCTCTTAGTAACTATTGTTTCTCTTATGGACTTGAACCTGAAAATGCTGGCTTGTATTCTTTACTTCCCATTATGCCTCTCAAATCTGATGGATCTCTTTATGAAATGGAAGCTCTTAGCAGGTCACATACACAAGCAATGAGTACTACTTCAGCACCAAAACTAGAGAATTTTTTAGGTAGTGAAGCTATGGGGACCCCTCATTATGCATGTAGTAGTACTGTCACAGAAGCAATGCCTTTGAGCTTAGACAGCATGTTCCAAAATCAAGTTCAACAAAACATGAACAACCAACAACAATTGTCATATTATAACTCAACTTTGAGAAACCATGAGTTGATGTTAGAAGGGTCAAAGCAAAGTCAAACTTCAAATGGAAACTTCCATGTTTCAAACATGGGTGAGGATCATGGACTTAATGGTCTAAAGAGCTGGGTTTTAAGGAATTTTCCAGCTAGTCATGGACATGATCAGTCAAAGATGATTGTTCCTGTTGTGGAGGAGAATGAAGGTGAATGTGGATCCAATATTGGTTCAATGGCTTATGGAGATTTGCATTCTTTGAGTTTGTCAATGAGTCCTAGCTCACAATCTAGCTGTGTTACAACCTCACAAAATATGTCATCTGCTGTTGTTGATAATTCTGTTGCTATGGATACAAAGAAAAGAGGACATGAAAAATTTGAGCAGAAGCAAATAGTTCATAGGAAATCTATTGATACTTTTGGTCAAAGAACCTCTCAATATAGAGGTGTAACAAGGCATAGGTGGACTGGGAGATATGAAGCTCATTTATGGGACAATAGTTCCAAGAAAGAAGGCCAAAGCAGAAAAGGAAGACAAGTTTATCTTGGGGGTTATGATATGGAAGAAAAAGCTGCTAGAGCTTATGATCAAGCAGCACTCAAGTATTGGGGACCATCCACTCACATAAACTTCCCTTTGGAAAATTATCAAAACCAACTTGAGGAAATGAAGAATATGACTAGACAAGAATATGTTGCTCATTTGAGAAGAAAAAGCAGTGGATTCTCAAGAGGTGCTTCCATGTACAGAGGAGTAACAAGACACCACCAACATGGAAGATGGCAAGCTAGAATTGGTAGGGTGGCTGGTAACAAAGATCTATATCTTGGAACTTTCAGTACACAAGAGGAAGCAGCTGAAGCTTATGACATTGCAGCTATAAAATTCAGAGGAGCTAATGCAGTGACCAACTTTGATATAATAAAATATGATGTTGAAAAAATCATGGCAAGTAGTAACCTTCTTAACATTGAACAAGCTAGAAGGAACAAAGAGGTGGTAGATATTACTACAACTCAATACATTGATCAAAACAAGCCTTCTTCTGCATATGACATCAACACTCAAGAAGCAATTTTAATGCAGAAGAATATGATTCTGTACCAATCCTCCCAACAACAATTACTTCAACAGAGTCAACCAAGAATTGAGAATGAAAGAACTCATCAATCATTTTCCTCAGTGTCTTTGGATAACATGTTTCATCAAGACGTAGTTGAGGAAGCAAGTAAGATGAGAACACATGTGTCAAATGCTTCTTCATTGGCTACAAGTTTGAGTAGCTCAAGAGAAGGTAGTCCTGATAGAACAAGCTTGCAAAATCTCTCAGCAATAATGCCTTCAACAGCTTCAAAACTATTGGCTACTACTACTCAGAATAGTAACATGAATTCTTGGGATCCTTCACAACATCATCTTAGGCCTACTCTTTCTTTGCCTCACATGCCAGTTTTTGCTGCTTGGACAGATGCTTAG 1968 0.3796 MKRMENNDDGVDINNGNNWLGFSLSPQMNNIGVSSHTHHHSQPSSSAASEVVPLQASFYHSSPLSNYCFSYGLEPENAGLYSLLPIMPLKSDGSLYEMEALSRSHTQAMSTTSAPKLENFLGSEAMGTPHYACSSTVTEAMPLSLDSMFQNQVQQNMNNQQQLSYYNSTLRNHELMLEGSKQSQTSNGNFHVSNMGEDHGLNGLKSWVLRNFPASHGHDQSKMIVPVVEENEGECGSNIGSMAYGDLHSLSLSMSPSSQSSCVTTSQNMSSAVVDNSVAMDTKKRGHEKFEQKQIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSSKKEGQSRKGRQVYLGGYDMEEKAARAYDQAALKYWGPSTHINFPLENYQNQLEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGANAVTNFDIIKYDVEKIMASSNLLNIEQARRNKEVVDITTTQYIDQNKPSSAYDINTQEAILMQKNMILYQSSQQQLLQQSQPRIENERTHQSFSSVSLDNMFHQDVVEEASKMRTHVSNASSLATSLSSSREGSPDRTSLQNLSAIMPSTASKLLATTTQNSNMNSWDPSQHHLRPTLSLPHMPVFAAWTDA* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3720 655 SMART rav1_2 310 382 IPR001471 GO:0003700|GO:0006355
Mal5g3720 655 SMART rav1_2 412 476 IPR001471 GO:0003700|GO:0006355
Mal5g3720 655 CDD AP2 411 471 IPR001471 GO:0003700|GO:0006355
Mal5g3720 655 MobiDBLite consensus disorder prediction 576 602 - -
Mal5g3720 655 Pfam AP2 domain 413 462 IPR001471 GO:0003700|GO:0006355
Mal5g3720 655 Pfam AP2 domain 310 368 IPR001471 GO:0003700|GO:0006355
Mal5g3720 655 ProSiteProfiles AP2/ERF domain profile. 412 470 IPR001471 GO:0003700|GO:0006355
Mal5g3720 655 SUPERFAMILY DNA-binding domain 411 470 IPR016177 GO:0003677
Mal5g3720 655 Gene3D AP2/ERF domain 412 472 IPR036955 GO:0003700|GO:0006355
Mal5g3720 655 Gene3D AP2/ERF domain 309 378 IPR036955 GO:0003700|GO:0006355
Mal5g3720 655 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 15 653 - -
Mal5g3720 655 SUPERFAMILY DNA-binding domain 309 378 IPR016177 GO:0003677
Mal5g3720 655 ProSiteProfiles AP2/ERF domain profile. 310 376 IPR001471 GO:0003700|GO:0006355
Mal5g3720 655 CDD AP2 309 376 IPR001471 GO:0003700|GO:0006355
Mal5g3720 655 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 15 653 - -
Mal5g3720 655 PRINTS Ethylene responsive element binding protein signature 452 472 IPR001471 GO:0003700|GO:0006355
Mal5g3720 655 PRINTS Ethylene responsive element binding protein signature 311 322 IPR001471 GO:0003700|GO:0006355
Mal5g3720 655 MobiDBLite consensus disorder prediction 577 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3720 Mal-Chr5 105053192 105056706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3720 1 504 AP2-EREBP Transcription Factor Family AT4G37750 53.445 1.01e-162 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mal5g3720 AP2 8.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3720 K09285 - gmx:100792451 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1428 6 25645955 25649692 Mal5g3720 5 105053192 105056706 PCT